Sphingobacterium sp. 21: Sph21_0475
Help
Entry
Sph21_0475 CDS
T01450
Name
(GenBank) hypothetical protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00040
Pentose and glucuronate interconversions
shg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Sph21_0475
Enzymes [BR:
shg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
Sph21_0475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
DUF5680
PD40
Motif
Other DBs
NCBI-ProteinID:
ADZ77057
UniProt:
F4C6M1
LinkDB
All DBs
Position
complement(555572..556834)
Genome browser
AA seq
420 aa
AA seq
DB search
MKKLLLFFFALLQVAILPAQPLLETGGKEMPDEWVDNVTHHRVMRLVRRPGINLSFYFHN
NPFVGNEMVFYGSNERQKESYTGELKNKAQEIYNLNVKDKQLYVVNLENLKVRRLTQESG
KIQGEIVHAKSGKVYYQCQDSVFSVAVKTGKKELIFVFPADFKASITTINADASLLGGAY
ATEEEKEISKRYPEKSQYFNRIYEARLPRTLFTIDIKTRQLQKIFTDSAWLNHVQFSPTD
PNLLMFCHEGPWHKVDRIWTINVKTKATPKLIHKRSMDGEIAGHEWFDKQGDYIWYDLQL
PRGQTFFVGGTDLKSGKEIKYQLKRNEWSVHYTSAADNKTFAGDGGDPGSVAKAPDGQYI
YLFKPQGDHFEAERLVNMKHHNYKLEPNVHYSPDGKWIIFRANFEGFEGIYAVEIEKARN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcttttattgtttttctttgctctgctgcaggtagcgatcctacctgcgcaa
ccattattggaaaccggcggaaaggaaatgccggatgaatgggtcgacaacgtaacacat
catcgggtgatgcgtttggtgcggaggccgggaatcaatttgagcttctattttcataac
aatccttttgtgggaaatgaaatggttttttatggaagtaatgagcgacagaaagaaagt
tatacaggagagctaaagaataaggcacaagaaatctataaccttaatgtgaaagacaag
cagctttatgtagttaatttagaaaacttgaaagttcgccggttaacgcaagaatccgga
aaaatccaaggggaaatcgtgcatgcaaaaagcgggaaagtatattatcaatgtcaggat
agcgtattcagcgtagcggtaaaaacgggtaaaaaggaactgatctttgtatttccggca
gatttcaaggcctcgattacaacgatcaatgctgacgcttccctactaggcggagcctat
gccacggaggaagagaaagaaatttcaaaacgctatccggaaaagagccagtatttcaat
cgcatttatgaagcaagattaccgagaacattatttaccatcgatatcaaaacaaggcaa
ctgcaaaagatatttacagatagcgcctggttaaatcatgtacaattttctcctacagat
cccaacttattaatgttctgtcacgaaggcccttggcataaggtcgatcgaatctggacc
attaacgtaaaaacaaaagctacgcccaaactcattcataaacgcagcatggatggggag
atagcagggcatgagtggtttgataagcagggggattatatctggtacgacttgcaattg
ccgcgtggacaaactttttttgtgggaggaacggatctcaagagcggaaaagagatcaaa
taccaactaaaacgaaatgaatggtcagtgcattacacctcagctgccgataataaaacc
tttgctggcgatggcggcgatccagggtcggtagctaaagcaccggacggacaatatatt
tatctttttaaacctcaaggtgatcactttgaggcggagcgcttggtcaatatgaaacat
cataattataagctggaaccgaatgtgcattattcaccggacgggaaatggatcatattc
cgggcaaattttgaaggctttgaaggtatatatgcagttgagatagaaaaagcgaggaac
taa
DBGET
integrated database retrieval system
