Salvia hispanica (chia): 125186696
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Entry
125186696 CDS
T09851
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00906
Carotenoid biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
125186696
Enzymes [BR:
shis01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
125186696
BRITE hierarchy
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
Pyr_redox
HI0933_like
Pyr_redox_3
NAD_binding_8
FAD_binding_2
Trp_halogenase
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-GeneID:
125186696
NCBI-ProteinID:
XP_047939068
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All DBs
Position
5:16969299..16971217
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AA seq
500 aa
AA seq
DB search
MDTLLKTHNKIQFLHPINGVADKVSSFGSFKGRSFESKSQFKKFGKGLCVKASSSALLEL
VPETKRENLDFELPLFNPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW
PNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTTKDLQRPYGRVNRKQLKSKMMQKCI
TNGVKFHQAKVVKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVA
YGILAEVEEHPFDVDKMVFMDWRDAHLNNNRELKERNEKIPTFLYAMPFSSQRIFLEETS
LVARPGLPMRDIQERMVARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGM
VHPSTGYMVARTLAAAPIVANAIVQYLGSDRDVRGNDLSAEVWKDLWPIERRRQREFFCF
GMDILLKLDLHSTRRFFDAFFNLEPRYWHGFLSSRLFLPELVSFGLSLFYHASNTSRLEI
MGKGTLPLVNMVNNLLKDKE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgctcaagacccacaataagattcagttcctccacccaattaatggggtt
gctgataaagttagctcctttggctcattcaagggtcgtagcttcgaatcaaagtctcaa
tttaagaaatttgggaagggtttgtgtgtgaaggctagttctagcgccctacttgagctt
gtgcctgaaaccaaaagggaaaatcttgattttgagcttcccttgttcaacccttcgaag
ggggttgtggttgatcttgctgttgtgggtggggggcctgcagggcttgctgtagctcag
caggtgtccgaggctgggctttctgtatgctcaattgatccttctccgaagctgatatgg
ccgaataactatggtgtgtgggtggatgagtttgaggccatggatttgttggattgcctg
gacacgacttggtctggtgctgttgtgtacattgatgataaaacgaccaaggatctccaa
cggccgtatgggagggttaaccggaagcagctcaagtcgaagatgatgcagaagtgcatc
actaatggtgttaagtttcatcaggccaaggttgtgaaggtgatccacgaggaatccaag
tccctgctgatatgcaacgacggtgtcaccattcaggctgctgtggttcttgacgcgact
ggcttctcgcgttgccttgttcagtatgacaagccgtacaaccctggctaccaggtggcg
tatgggattctagcagaggtcgaggagcatccctttgatgtagataagatggttttcatg
gactggagagatgcgcatctcaacaacaatagagagctgaaggagaggaatgaaaagatt
ccgactttcctctatgcaatgccattctcttcacagagaatatttctagaagaaacttcc
cttgtagctcgtccgggtttacccatgagggatattcaggaacgaatggttgctcgactg
aaccacttaggtataaaagtgaagagcattgaagaggacgagcattgtgtgattcctatg
ggagggcctttgcccgtgctgcctcagagagtcgttggaatcggtggtactgcaggaatg
gtgcatccctcaacaggctatatggttgcgcggactctggctgctgccccgattgttgct
aatgctattgtccagtacctaggctctgatagggacgttcgtggtaatgacttatcagca
gaagtttggaaagacttgtggcctatagaaaggaggcgacaacgggagttcttctgtttt
ggtatggatattctgctcaagctcgatttacattccacgaggaggttttttgacgcattt
ttcaacttggagcctcgttactggcatggattcttgtcatcccgcctctttctccccgag
ctcgtctcatttggactctcccttttttaccacgcctcgaatacttctaggttagagatc
atgggaaagggcacacttcctctagtaaatatggtcaacaacttattaaaggataaggaa
tga
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