KEGG   Salvia hispanica (chia): 125193177
Entry
125193177         CDS       T09851                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125193177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shis03021]
    125193177
Enzymes [BR:shis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     125193177
Transcription machinery [BR:shis03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     125193177
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 125193177
NCBI-ProteinID: XP_047946888
LinkDB
Position
6:35552066..35560070
AA seq 1213 aa
MDGWDYIDEAGPSSINEKLTNGSRPMEFDDDIDFNCSESEDEADCALQELDKSFLKGFCK
KASIAFFEQFGLISHQINSYNDFVKHGIQKVFDSVGEITIEPGYDPTKRGDGEWKRAKLR
FGKVTLDHPTLWTGEKFSSTDGKEFLELLPRHAHLQNMTYSSKIKVETHLQVYTESPSRS
DKFKTGVDIVVEKTILNEYQTDINFGRLPVMVKSDLCWMSRPEPDGKERRDCEFDHGGYF
VIKGAEKTFIAQEQICLKRLWVAKDPTWTIAYRPVAKRTRVYIKLVPNVEHLKAGDKILT
VYFYAAEVPIWLLFFALGVPNDREVVKLIGLDTEEDSTIQNILMPSIHDADKKFEGFRKA
GNAIGHIMKLMKGSKFPPTESLEVLIHTYLFPNLRSQRQKASFLAYMVKCLLDAYRGRRK
VDNRDDFRNKRVELAGELLERELSVHIKHAERRMVKAIQRDLYKDREVQSIDHYLDASII
TNGLSRAFSTGAWVHPFKRMERMSGVVANLRRTNSLQAVCDMRRTRQQVSYTGRVGDARY
PHPSHWGKVCFLSTPDGENCGLVKNLSSLGLVSNNILGRESILKKFLECGMENLVDDDCC
LLGGRHKIFLDGDWVGVCKDSSAFVAKLRHKRRKMEVPQQIEIKRDKHQDEVRIFADAGR
ILRPLFVVQNLKKIKDLKGDFLFQSLLDNGIVEFIGPEEEEDCQTAWGIDYLFTAELDNP
PVKYTHCEFDSSFLLGLSCGIVPFANHDHARRVLYQSAKHSQQAMGYSTTNPSIRVDTNS
HQLYYPQRPLFRTMLSDCLGKSRYSEHHKGMMPRPDFFNGQSAIVAVNVHLGYNQEDSLV
MNRASLERGMFRTEHVRSYKAEVENSEAVGKRAKTDELVSFGKMQSKIGRVDSLDDDGFP
FIGANLQTGDIVIGKYAASGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRSP
CLGDKFSSMHGQKGVLGFLESQENFPFTVEGIVPDIVINPHAFPSRQTPGQLLEAALGKG
IALGGGLKYATPFSTPSVEDITSQLHRLGYSRWGGERMYDGRTGEKVETLIFMGPTFYQR
LTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL
SDSSQMHICRKCKNVAGVIQRTVVGGRRVRGPYCRFCEAVEDVVRVNVPYGAKLLCQELF
SMGISLKFETELC
NT seq 3642 nt   +upstreamnt  +downstreamnt
atggacgggtgggattatatagatgaagcaggacctagcagcataaacgagaagcttact
aatggttcgagaccgatggaatttgatgatgatatagacttcaactgttctgaatctgaa
gatgaggcggactgtgccctgcaagaactggacaaaagcttcctgaaaggtttctgtaag
aaggcttcgatagcattttttgagcagtttggtttaattagccaccagataaattcctat
aatgactttgtcaagcatgggatccaaaaagtctttgactctgttggggagattacaatt
gaacctggatacgaccctactaaaaggggagatggtgagtggaagcgcgcaaaactgagg
tttggaaaagtcacgcttgatcacccgacattgtggactggtgagaagttttcatcaact
gatggtaaagagtttttggagcttttgccgaggcatgctcatcttcagaatatgacctat
tcatccaagatcaaagttgagactcatcttcaggtgtatacagaaagtccatctagaagt
gacaaattcaaaactggtgtggatatagttgtagagaagacaatactgaacgagtatcag
actgatattaactttggcagactccctgtcatggtgaaatcggacttgtgctggatgagt
agacctgaacctgatggtaaagaaagaagagattgtgaatttgatcatggaggttacttt
gttatcaagggggctgagaagacattcattgcccaggagcaaatatgcctcaaaaggttg
tgggtggctaaagatcctacctggaccattgcatatcgtccagttgcgaaaaggacaaga
gtgtatataaagttagttccaaatgtggaacatttgaaagccggagacaagatccttact
gtatacttttacgccgcagaggttcctatttggctcttgttctttgctttgggtgttcca
aatgatagagaggtggtcaagctgattggtctggacactgaggaggactctacaattcaa
aacatactcatgccatcaatacatgacgccgataagaaatttgaaggtttccgcaaggct
ggcaatgcaatagggcatatcatgaagctgatgaagggcagtaagtttccacctacagaa
tctttggaggttttaatccatacctatctctttcccaaccttaggagccagcggcagaaa
gcttcttttcttgcgtatatggtcaagtgcctgctggatgcctacagagggcgccgcaaa
gttgacaacagagatgattttaggaacaagagggtggagttggcaggtgaacttcttgaa
cgagaactttccgtgcatatcaaacatgcggagaggcgaatggttaaggccatacagaga
gacctctacaaagatagagaggtgcagtccatcgaccactacctggatgcctcgatcatc
actaatggtctttccagagccttttcaactggagcgtgggtgcacccttttaagagaatg
gaaaggatgtctggtgtagttgctaatctcaggcgaacaaattcattgcaggcagtctgt
gatatgagaagaactcggcagcaggtctcatacacaggcagggttggtgatgctagatac
ccgcacccatctcactggggtaaggtttgctttctctctacaccagatggagaaaattgt
ggcctggttaagaatctgtccagcctgggtcttgtcagtaataatatactgggacgagaa
agcatccttaaaaaatttcttgagtgtggaatggagaatttggttgatgatgattgttgt
ttgctcggtggaaggcacaaaatttttctggatggagattgggttggagtgtgcaaagat
tcgtcagcatttgttgctaagctgagacacaagcgtcgcaaaatggaagtacctcagcag
attgagatcaaaagagataagcatcaggatgaagtgcgtatatttgctgatgctggaagg
atactgcgccctctctttgtagtccagaacttaaagaagattaaagatttgaaaggagac
tttttatttcagtcgcttctggataatggcatagttgagttcatcggaccagaggaggaa
gaagattgtcaaactgcgtggggaattgactacctgttcactgctgagttagataaccca
cctgtgaagtacacccactgcgagtttgatagttcattccttctaggtttaagctgtggg
atagttccttttgccaatcatgatcatgctaggagagttctttaccaatctgccaagcac
tctcagcaagccatggggtactcaaccacaaaccccagcattcgagttgatacaaattct
caccagctatactatccccaaaggcctcttttccgaactatgctatcggattgcctaggg
aagtcgaggtactctgaacaccacaaggggatgatgccaaggcctgatttcttcaacggc
cagagtgctattgtggctgtcaatgtccatcttggatacaatcaagaagattctctcgtg
atgaaccgtgcttctttagagcgtggcatgttcagaactgaacatgttaggagttataaa
gctgaagtcgaaaattcagaagcagtggggaaaagggccaagacagatgagcttgtaagt
tttggcaagatgcagagcaagattgggcgtgttgacagccttgatgatgacggctttccc
tttattggggcaaatctccaaactggtgacatagtcatcggtaagtatgctgcttcgggg
gtcgatcatagcatcaagctcaagcatacagaaaggggcatggttcaaaaggtcgtgctg
tcagccaatgatgaaggaaagaactttgcggttgtatctttgagacaggttcgttctcca
tgcctaggggacaagttttcgagcatgcacgggcagaaaggtgttctggggtttctggag
tctcaggagaactttccttttacagtggaaggaatagttccagacattgtgataaaccca
catgcatttccttctcgacaaacgcctggacaacttttagaggctgccctaggtaaaggg
attgcacttggtggtggactaaaatatgcaaccccattttccactccttctgtagaagat
ataacgtcccaacttcacaggctcgggtattcccgttggggaggggaaagaatgtacgat
ggacgtacaggtgaaaaagttgaaactcttattttcatgggtccgacattctaccagcgt
ctcacacatatggctgaggacaaggtgaagttcaggaacaccgggccggtgcaccctctt
actcgtcagcccgtggctgacaggaagcgtttcggtggtatcaagttcggtgagatggaa
cgagactgcctcatagcccatggtgcagcagccaacctgcacgagcggctgttcaccctc
agtgattcatctcagatgcacatatgcaggaagtgcaagaatgtggcaggtgtgatccag
cgaacagtggttggtggtcggagggtccgcgggccctattgtcgattctgtgaggctgtt
gaagatgtggtgagagtgaatgtgccttatggtgctaagctgctctgccaggagctcttc
agcatggggatttcgctcaaatttgagactgaattgtgctga

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