Salvia hispanica (chia): 125196903
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Entry
125196903 CDS
T09851
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125196903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125196903
Enzymes [BR:
shis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125196903
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125196903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
DUF2635
Motif
Other DBs
NCBI-GeneID:
125196903
NCBI-ProteinID:
XP_047951523
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All DBs
Position
6:complement(547316..556767)
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AA seq
886 aa
AA seq
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MARILTYPERVAQHNIEKLRQCIRNGPKKYPGAKFLTIPDGYEISLMYSARKHHADQLKY
GCIVHRHLEDGDVVLVNRQPSLQRMSIMSHLARIMPGRTLRFNQSLCNPYNADFDGDQMN
IHVPQTEEARAEALMLTGVLNNLCTPKNGEILVGSTQDFLTSSFLITRKDTFYDRSDFSL
MCSYIGDAMEPIDFPTPALCKPVELWTGKQLFSVLLRPHANMRVYLNLTVAEKSYGKSRE
TMCSKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSAR
WIGNHGFSIGINDVQPEATLNKEKMETVDNEYGYFTDAKGIVQNSFYTGLSVTDFFSHAM
CGREGFVDTMVKTADTGYVSRRLMRALEDLSICHDNTVRNASACIVQFAYGVDSMDPAQM
EDKSGFPLNFERLFLKAKATCPAKEQKSLTIDEIEKIVENIIERRLVKSSMTPEDECLAG
FAESIRNFIKQKGPSSICKKLKLSEGRHSEEDRCYLENVAYNISGITQRQLMDFLETCIS
CYNSKKIEAGTPIGAIGAQSIGVASMKWVPRMKEIVDGSEKIKKPIITTHLEDNNNDITA
KMVKARIEITLLKQVVQIITASKSLKSASIVVTLDMDKIKEAHLHIDAHSVKKSILQSVP
KLKLKEQQIRVLDERKLEVTLAADKSKLLFELHELMSKLAKVVVKGIRSIYCSTIHDESE
EKDPDVCKKLTLLVEGNGLLSVMGTEGVNFQTTVSNNIMEVQQVLGIEAARKKIIDEINY
NMSSHGMTIDTRHVMLLADLMSFQGVVLGMNRFGMERMRDSVLMHASFEKTADHLFNASV
NGRVDKIEGVSECIIMGIPMQVGTGMLKVMQSVPSVELTYAPDPII
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggctcggattttgacttatcctgaacgagttgcacaacataatattgagaaattgcgg
cagtgtattcgcaatggccccaaaaaataccctggtgctaagtttttaacgatacctgat
ggttatgagatatcattgatgtattctgctcggaagcatcatgcagatcagttgaagtat
gggtgcattgtgcatcgtcatcttgaagatggagatgtggttctagttaatagacaaccg
agtttgcaacgaatgtcaatcatgtcccatctggcaaggataatgcctgggcgcacactg
agattcaatcagtcattgtgcaatccgtacaatgcagactttgatggcgatcagatgaac
atacatgtaccacaaacagaagaggcccgtgctgaggctcttatgctaacaggggtgctg
aacaatttgtgcaccccgaaaaatggagaaatcttggttggatcgacacaggattttcta
acttcttcctttcttataacacgaaaagacacattttatgaccgctcggacttttcactc
atgtgttcatatatcggtgatgccatggagccaattgattttccaaccccagcattatgt
aagccggtggagctatggactggcaaacaattattcagtgtgctattgcgtccccatgca
aacatgagagtatatttaaatcttactgtagcagaaaagtcttatgggaagtctagagaa
actatgtgttccaaggatggttttgtgtatattcgcaatagtgagcttatcagcgggcag
cttggaaaggccacattaggtaatgggaataaggacggtatttactcggttcttctcagg
gattatggtccacatgcggctgctacctgcatgaatcgcttggcaaagttaagtgcacga
tggataggaaatcatggattttcaattgggatcaatgatgttcaacctgaggctacattg
aacaaggagaagatggagactgtggataatgagtatggctacttcaccgatgctaaaggc
attgttcagaattccttctacactggtttatctgtgactgattttttttcccacgccatg
tgtggtagagaaggttttgtcgatacaatggtcaaaacagccgatacaggttatgtgtct
cgtagattgatgagggctttggaggacctatctatctgtcatgataatacagtgagaaat
gctagtgcttgcattgtgcaatttgcttacggtgttgattccatggatcctgcacagatg
gaagataaaagtggtttcccgctgaactttgaaagattatttttgaaagccaaggctacc
tgccccgcaaaagagcagaagagtttaactattgatgaaattgagaaaatagttgaaaac
attattgagagaagactagtaaaatcatccatgactcctgaagatgaatgtttggcgggt
tttgcagagtcaataagaaattttattaagcagaaggggcctagctcaatatgcaagaaa
cttaaattgagtgaaggaagacattctgaagaagatagatgttatctggaaaatgttgca
tataatatatctgggataactcagcgacaattaatggatttcctagaaacttgtatatct
tgttacaattccaagaaaattgaagctggaactccaataggagccattggagctcagagt
atcggagtcgcaagcatgaaatgggttcctaggatgaaagaaattgttgatggttctgaa
aaaatcaagaaacccattattactacacatctggaggataacaacaatgacataacagct
aaaatggtgaaagcgcgtattgagataacccttctgaagcaggtagtacagatcataacg
gcttcaaaatcattgaagtcagcatccattgttgtaacacttgacatggataaaataaaa
gaggctcacctacatattgacgcgcactcagtaaagaagtcaattctacaatccgttcca
aagttaaaactgaaagagcagcaaattagagtattggacgaacgaaaacttgaagtcact
ctggcggctgataaaagtaaacttctatttgaactccacgagcttatgagtaagctcgcc
aaagttgtagtcaagggaatcaggtccatttactgctctacaatacatgatgaatcagaa
gaaaaagatcctgatgtgtgcaaaaagttgacattactagtagaggggaatggtcttttg
tctgtcatggggactgaaggtgttaattttcaaacgacagtgagtaataacatcatggaa
gtacaacaggtacttggaattgaagctgcaaggaagaaaataattgatgagataaactac
aacatgtcaagccatggcatgaccatagacacacgacacgtgatgctgctggctgactta
atgtcattccagggtgtagtgttgggtatgaacagatttggcatggagagaatgagggac
agtgttttgatgcacgcttcatttgaaaagactgcggatcacctcttcaacgcttctgtg
aatgggagagtcgataagattgaaggagtctctgaatgcatcatcatgggcatacccatg
caagttggtacgggaatgcttaaagtgatgcaaagtgtgccgtctgttgagttgacgtac
gctccagatccaatcatatga
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