Salvia hispanica (chia): 125201383
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Entry
125201383 CDS
T09851
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125201383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125201383
Enzymes [BR:
shis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125201383
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125201383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
FtrD-like
Motif
Other DBs
NCBI-GeneID:
125201383
NCBI-ProteinID:
XP_047955426
LinkDB
All DBs
Position
1:complement(18935041..18947904)
Genome browser
AA seq
1153 aa
AA seq
DB search
MVVREDDADLFNGLHEKGLNIDKQALAAPVKKAVDKFKLVPEFLKVRGLVKQHLDSFNFF
ARIGIKKIVQANNLITHSRDQNIFLRYKEVRVGEPSLMSDSVTDNLTPQKCRLYDITYAA
PIYVNIEYSNGANERVQSKNNVIIGRLPIMLKSSCCVLYERDEEELARYGECPLDPGGYF
IVKGTEKVILMQEQLSKNRIIIDTDQKGCVQASVTSSSETRKSKTVIRIEKEKIYLHLNG
FTSKVPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEDSVKEGVHTQSQALEFLDR
KVQKSQFYTPIVKEGRALKILQETFLANVPVHENNLRPKCIYVAVMLRRMIEAILNKDTL
DDKDYVGNKRVELSGQLLALLFEDLFKTMNEMAQQKIEALLNKTARTSRFDISQHIRNDC
ITNGLERALSTGNWDIKRFRMNRKGMSQVLGRLSYIGTVGHMTRIAPQFEKSRKVSGPRA
LQPSQWGMLCPCDTPEGESCGLVKNLALMAHVTTDEDERPLIALCYALGVEDLELLSAEE
LHMPDSYLVMFNGLILGKHKMPQTFANSMRKLRRAGKIGEFVSIFVNEKQRCVYLASDGS
RVCRPLVIADKGVSRIKEHHMKELRDGVRNFQSFLKEGLIEYLDVNEENNALIALYEENA
REETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRFDSLIY
LLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
VMKKLVAINQKYANGTSDRIIRPQRDGHDAEQTQILDDDGLASPGEIIRHRDIYINRQSP
IDTKSGGSISNTVKLKDSQYKSSKQYYKGTEGDTAVVDRVALCTDKNSNLCIKYMIRSTR
RPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMIELLGS
KAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFSYNGKDFLYSGITGEPLQAYIFM
GPIYYQKLKHMVLDKMHARGNGPRVMMTRQPTEGRSKNGGLRVGEMERDCLIAYGASMLI
HERLMLSSDPFEVQVCRKCGLMGYYNEKLKTGICSMCKNGENISTMKMPYACKLLFQELQ
SMNIVPRLKLTDV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgagagaagacgatgctgatttgttcaatggtttacatgagaaaggactgaat
atcgacaaacaagctcttgctgccccggtgaagaaggccgtggacaagttcaaattagtc
cccgagtttttgaaggtgagaggtctcgtcaaacaacatttggattcctttaatttcttt
gcacggattgggataaagaagattgttcaagccaataatctcatcacccatagccgagac
caaaatatttttttgagatacaaagaagtaagagttggtgaaccatcactgatgagtgac
tctgtcactgataaccttaccccccagaagtgtcgtctgtacgacatcacctatgcagct
ccaatatacgtgaacatagagtattcgaatggtgcaaatgaaagggttcaatcgaagaat
aatgtcattattgggagattgcctatcatgctaaaaagttcctgttgtgtattgtatgag
agggatgaagaagaacttgccagatatggtgaatgcccacttgatcctggaggatatttc
atagttaaagggacagagaaggtgattttgatgcaagaacaactttcaaagaacagaata
atcattgatactgatcaaaaaggatgtgtgcaagcatctgttacaagcagttcggagacc
agaaaaagtaagactgtcataaggattgagaaagagaagatatatcttcacctgaatggg
tttacaagcaaggttcccattatgatagtcctgaaagctatgggtatggaaagtgatcag
gaggttgtccagatgattggaagagaccctcgatacagtgaattgctattgccttcgatc
gaggatagtgtgaaggaaggtgtacatacacaatctcaggccctggaatttcttgaccga
aaggttcagaagtcccaattttatacaccaatagtgaaggaagggcgtgctctaaaaatt
cttcaggaaacatttcttgccaatgttcctgtgcatgaaaacaatttacgtccaaaatgc
atatatgttgctgtaatgctgagacgcatgattgaagcaatattaaacaaggatacattg
gatgataaggattatgtgggcaataaaagagtggagctatctggccaattgctagcacta
ctttttgaggacttattcaagacaatgaatgaaatggcccaacaaaagattgaagccctc
ctaaataagacagcgcgtacttctcggtttgacatttcccagcatataaggaatgactgc
attactaatggtttagaaagagctctctctaccggaaattgggatatcaaaagattcagg
atgaacaggaaaggcatgtcacaggttttaggtagactctcatacataggaactgtaggg
cacatgacaaggatcgctccacagtttgaaaaatctagaaaagtcagcggccctagagct
ttacagcctagtcagtggggaatgttgtgcccttgtgatactccagaaggtgaatcttgt
gggttggtgaaaaatctggcactgatggcgcatgttacaactgatgaagatgagcgccct
ctcattgctctgtgctacgctcttggggtggaagatttggaattgctctctgccgaagaa
cttcacatgccagattcgtatttagttatgttcaatggacttattcttggcaagcacaaa
atgccacaaacattcgccaattcaatgagaaaactgcgaagggctgggaaaattggcgag
tttgtaagcattttcgttaatgaaaaacagcgctgtgtttaccttgcttccgatggtagt
cgtgtttgtcgtccacttgtaattgccgacaaaggtgtatcaagaattaaggagcaccat
atgaaagagctgagggatggagtccgcaactttcagagtttcctgaaagaaggcttgatt
gaataccttgatgtaaatgaggagaacaatgctttgatcgccttatatgaagagaatgct
agagaagaaacgacccatattgaaatagagccttttaccatattgggcgtgattgccggg
ttgataccttatcctcatcataaccagtcaccaagaaatacatatcagtgtgctatgggg
aaacaagctatgggcaatattgcatataatcagttgtgtaggtttgacagtttaatctac
ctcttagtttatccacaacggccattactaactacacgaacaattgagctggtctcctat
gataaactaggagctggacagaatgctactgttgcagttatgagctatagtggatatgac
atagaggatgcaattgttatgaataagtcatcattggatcgtggttttggtcgatgcatt
gtaatgaaaaaactggtagcaattaaccagaagtatgcaaatggcacctctgatcgcatt
attagaccccaaagagatggacatgatgctgaacaaacacagattttggatgatgatgga
ttagcatctcctggagaaataattcgtcaccgtgatatctatatcaacaggcagtccccc
atagacacaaaaagcggaggcagtatcagcaacaccgtaaagcttaaggatagtcaatat
aagtcaagtaaacaatattacaaaggtactgaaggagatacagctgtcgttgatagagtg
gcactctgcactgacaagaatagcaacttatgtatcaaatatatgattcgttctactcgt
aggccagaggttggtgacaagtttagtagccgtcatggacaaaaaggagtttgtggcacc
attgttcagcaggaagatttcccattttctgaacgtggagtatgtccagatttaatcatg
aatcctcatggatttcctagccgtatgactgttgggaagatgatagaacttcttggtagc
aaggctggcgtttcttgtggtaggtttcactatggcagtgcatttggggagcctagtggt
cacgcagataaagttgagactataagtgaaacccttgtgaagcatggtttcagctacaac
gggaaggactttctctactcaggcatcaccggcgagccactgcaggcatatattttcatg
gggcccatctactaccaaaagttgaaacacatggtccttgataaaatgcatgctcgaggt
aatgggccacgtgttatgatgactagacaacccacagaagggaggagtaaaaatggaggt
ctgagggtgggtgaaatggagcgtgattgcttgattgcgtatggagcgagtatgttaata
cacgagcgcttgatgctctcgagtgatcctttcgaagttcaggtatgccgcaagtgtggc
ttgatggggtattacaacgagaagctcaaaacgggtatctgttccatgtgcaagaatggg
gagaatatatccacaatgaaaatgccatatgcttgcaaacttctattccaggagctacag
tccatgaacatcgtcccgcgtttgaaactaacagatgtatga
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