KEGG   Salvia hispanica (chia): 125201890
Entry
125201890         CDS       T09851                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
shis  Salvia hispanica (chia)
Pathway
shis03020  RNA polymerase
shis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125201890
  09124 Replication and repair
   03420 Nucleotide excision repair
    125201890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shis03021]
    125201890
   03400 DNA repair and recombination proteins [BR:shis03400]
    125201890
Transcription machinery [BR:shis03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125201890
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125201890
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD zinc_ribbon_4 DNA_RNApol_7kD
Other DBs
NCBI-GeneID: 125201890
NCBI-ProteinID: XP_047956138
LinkDB
Position
1:8934175..8936137
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQVLQ
DVAADPTLPRTKSVRCANCGHGEAVFFQATARGEEGMTLFFVCCNPNCGNRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgccgtgaatgtaacaacatattgtacccgaaggaagacaaa
gagcagaagattctactttatgcttgccgaaattgtgatcaccaggaggttgctgataac
aattgtgtgtatagaaatgagatacatcattctgttggagagcgcacccaagtcctgcaa
gatgttgctgcagatccaacacttccacgaacaaaatcagttcgttgcgctaactgtggt
catggagaagctgttttcttccaggcaactgccagaggagaagaaggaatgacgttattc
ttcgtttgctgcaaccccaactgtggcaatcgctggagagattaa

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