Salvia hispanica (chia): 125210761
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Entry
125210761 CDS
T09851
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125210761
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125210761
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
AC_1
Motif
Other DBs
NCBI-GeneID:
125210761
NCBI-ProteinID:
XP_047966298
LinkDB
All DBs
Position
3:complement(5614788..5617017)
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AA seq
401 aa
AA seq
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MIKTCFLCLLVSHVVLGIDGAPKGRILQGETVFDITNYGAKGDGTTDDAMALIQAWRAGC
DSAGAARILVPAGKSFMMGEVIMRGPCKAAKPIVLDIQGTINANPEPSSYSNMMWILIEY
VDGMIVTGGGTIHGQGQNVWKYADDTTRMPVSFTFQSSKNGDINNLNFVDAMGFHTKLID
SIDLKVSHLKITAPDESPNTDGMHFSNATNVDMSDCVIGTGDDCISIGTGSKNMLFQRIQ
CGPGHGLSVGSLGKRPDELPVGNITFLNCSLSGTTNGARIKSYHNSPELTADHIIYKDII
MDKVKNPILIDQHYDSKTKSEQSSVKISDVHFINIKGTTISKVPILLNCSSKYPCDNIEL
ADISLKPEPPLTESSSACVSTTNLKVSGTIIPPAPTACTVP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagacatgttttctctgtttattggttagccatgttgtgctgggaattgatggt
gcccccaaaggccgcattctgcagggcgagaccgttttcgatatcacaaactacggagct
aagggcgatggcacaacagatgatgcaatggcattgattcaggcatggagggcgggatgc
gatagtgcaggggcggctaggattctagtcccggccgggaaatcgttcatgatgggagag
gtgatcatgagggggccatgcaaggcggcgaagccaattgtcctcgacatccagggcacc
atcaatgccaatccggaacccagctcctattccaacatgatgtggatcttgatcgaatat
gtcgacggcatgattgtcactggtggaggcaccatccacgggcaaggacaaaatgtttgg
aagtatgccgacgatacgacccgtatgcccgtcagttttacattccaatcatccaaaaac
ggagacataaacaacctaaatttcgtggatgcaatgggattccataccaaattgatcgac
agcatcgacttgaaggtgagccatttgaagatcaccgctcctgacgagagccccaacacc
gacggaatgcactttagcaacgccacgaacgtcgacatgtccgattgcgtcattgggacc
ggggacgactgcatctccatcggaacgggtagcaagaacatgttgttccagcgaatccaa
tgcggccccggacacggactctctgtggggagcttgggcaagcggcccgacgaattgccc
gtcgggaacatcaccttcctcaactgcagcctgtcggggaccacaaacggcgcgaggatc
aagagctaccacaactcgcccgagctcaccgccgaccatatcatatacaaagacatcata
atggataaagtcaagaaccccatcctcatcgatcaacattacgactccaagaccaagtcg
gagcaatcgagcgtgaagatctctgacgtccacttcataaacataaagggcacgaccatc
tcaaaagttccaattctattgaactgcagctcaaagtatccatgcgacaacattgaattg
gccgacattagcttgaaaccggagcctccattgaccgagagctcgtcggcgtgcgtcagc
accaccaacttgaaagtcagcggcaccataatcccgccagctccgactgcttgtactgtc
ccttag
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