Salvia hispanica (chia): 125212443
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Entry
125212443 CDS
T09851
Name
(RefSeq) ABC transporter D family member 1 isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
shis04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125212443
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125212443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125212443
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
125212443
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
125212443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
Mg_chelatase
UCR_Fe-S_N
Motif
Other DBs
NCBI-GeneID:
125212443
NCBI-ProteinID:
XP_047968572
LinkDB
All DBs
Position
3:complement(13539359..13553317)
Genome browser
AA seq
1332 aa
AA seq
DB search
MPSLQLLQLTEHGRGLLSSRRKALLLATSVVAVGGTAAAAYVQSRNSSRRHNSFGNSNGV
EDIKSEQDQLIETDKNVRTSKQRRGTLRSLQVLVAILLSRMGRMGALDILSLLAIAVSRT
AVSNRLAKVQGFLFRSAFLRRVPAFLRLIIENILLCFLLSTLNSTSKYITGTLSLRFRKV
LTKLTHAQYFQNMVYYKMSHVDGRISNPEQRIASDIPKFCSELSDLVQEDLIAVTDGVLY
TWRLCSYASPKYIFWILAYVLGAGGTIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAE
SIALYGGEKREEFHIQKKFENLVRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPF
FSGNLRPDSSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMG
ISRELATRDASSQQPDGHRNYVSEANYIEFDGVKVVTPTGNVLVEDLTLRVESGSNLLIT
GPNGSGKSSLFRVLGGLWPLISGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPL
TADQEVEPLTENEMAELLKNVDLEYLLDRYPSEKEVNWGDELSLGEQQRLGMARLFYHKP
KFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHY
KRAESPALTDSEIVTRRSFDTERQSDAMTVQRAFANTKEPAFSASRSHSSQLLAASLSEG
DDYLPPAFPQLQIVPRILPLRVASMFKILVPTVLDKQGAQLLAVAILVLSRTWISDRIAS
LNGTTVKFVLEQDKAAFIKLIGVSVLQSAASSFVAPSLRHLTSLLALGWRIRLTRHLLRS
YLRKNAYYKVFNISRANIDADQRLTQDLEKLTSDLSGLVTGMVKPTVDILWFTWRMKLLT
GRRGVAILYTYMLLGLGFLRIVTPDFGDLTSQEQQMEGTFRYMHERLRTHAESVAFFGGG
SREREMIDMKFGALFNHSMLLLRKRWLFGIIDDFITKQLPHNVTWGLSLLYAMEHKGDRA
LTSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLETDHHGE
YNGSLRSKSAELSDDIISFSKVDIITPGQKVLARQLECEIVPGKSLLVTGPNGSGKSSIF
RVLRGLWPVVSGNLIKPYQEVDYKSQCRLFYVPQRPYTCLGTLRDQIIYPLSCDEAEKRL
LYLAEEGEESNGATNFLDKHLRSILEKVKLLYLLEREGGWDTSQNWEDILSLGEQQRLGM
ARLFFHKPQFGVLDECTNATSVDVEEHLYKLATESGITVITSSQRPALIPYHSVELRLID
GEGKWELRTIQQ
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcagcttctacagctgactgaacatggtcgtggccttctgtcctcaaga
aggaaagctctactacttgccactagtgttgtagctgttggtggaactgctgcagctgct
tatgtgcagtcgcgaaatagctctagaaggcacaattcttttggtaattccaacggagtg
gaggacattaaaagtgaacaagaccaattgatcgaaactgataagaatgtcagaacgagt
aagcagaggagagggactttgagatctctccaggttttggtggctattctgttatctcgt
atggggcgaatgggtgcactagatattttatcgctgctggctatagcggtctctagaact
gctgtaagcaacagattagctaaagttcaaggttttctgttccgttctgcttttctccgg
cgtgttccagcatttctgcgtcttattattgaaaatattttgctttgtttcctcctgtca
acactgaattccacctccaagtacataacagggactctaagtttacggttccgtaaagtc
ttgacaaagcttacacatgcacaatattttcagaatatggtgtactacaagatgtctcat
gtcgatggccgaataagcaaccctgagcagcgaattgccagtgatataccaaagttttgt
tctgagctgagtgatcttgtacaagaggatctaattgctgttacagatggggtgctttat
acttggcgtctatgttcatatgcaagccccaaatacattttctggatactggcttacgtg
ttgggggcagggggcacaattaggaatttctcacctgcatttggaaagctcatgtccaaa
gaacagcagcttgaaggtgaatataggcagttgcattcacggttaaggacccatgcagaa
agcattgcactctacggaggagaaaagagagaagagtttcacattcagaagaagtttgaa
aatcttgttaggcacatgagggttgttcttcatgatcattggtggtttggcatgattcag
gatttcttactcaagtatcttggtgctactgttgctgttatcttgattatcgagcccttt
ttctctggcaatctcagacctgactcttctaccttgggacgcgcagagatgctgagcaac
ttgagatatcatacaagtgttataatttcattatttcagtcactgggaacactttctata
agttcgaggcggcttaatcgcctgagtggttacgcagatcgtatacatgaactcatgggt
atatctagagagctagccacacgggatgcatcttctcaacagcctgatgggcataggaac
tatgttagtgaggctaattatatcgagtttgatggtgtcaaggttgttactccaaccggc
aatgtcttggtggaggatttgactctaagggttgaatctggctctaatcttttaataact
ggtccaaatggaagtggaaaaagctccctctttcgtgttttgggtggtttatggccgttg
atatctggtcatatcgtgaaacctggagttggttctgatttaaataaggagatcttctat
gtaccacaaagaccatatacggcagtggggactctgcgcgatcagctaatttatccactg
acagcagatcaggaggttgaaccccttacagaaaatgaaatggcagagttactgaaaaat
gtggatcttgagtatctgctagaccgctacccatctgagaaggaggttaattggggtgat
gaattgtctttaggagagcaacaaagactgggaatggctcgtctgttttaccataaacct
aaatttgctatcctagatgaatgcacaagtgctgtgactactgatatggaagaacgtttc
tgtgccaaagttcgagcaatgggtacctcatgcatcacaatttctcatcgccctgcatta
gtcgcctttcatgatgttgtcctatctctggacggtgaaggaggctggagtgtccattac
aaaagggctgagtctccagctcttacagattctgaaattgttacaagaagaagttttgat
acagagcgccaaagtgatgcgatgactgtccaacgtgcatttgctaatactaaggaacct
gcattttctgcttctaggtcacattcttcacagttgctagcagcatctcttagtgaagga
gatgactatttgccacctgcttttcctcagctgcaaattgttccaaggattttacctctc
agagtagcttccatgtttaagatactagtacccacagtgcttgataagcagggcgcacag
ctgcttgcagttgccatattagtgttatccaggacctggatatcagatcgcattgcttct
ttgaatgggacaactgtaaaatttgtcctggagcaagataaggctgccttcatcaagttg
atcggtgttagcgttcttcaaagtgctgcatcttcatttgttgctccatcgttgaggcac
ctgacgtctttgcttgcacttggatggagaattcgcctcaccaggcacttgcttcggagc
tacctaagaaagaacgcatattataaggtatttaacatatcacgagcaaacattgatgcg
gatcagagattaactcaagacttggagaagttgacctctgatttgtctggtttggtcact
ggaatggttaaaccgactgttgatatactatggttcacctggagaatgaagctactgact
ggtcgacgaggagtggctattctgtacacatacatgttactaggtttaggattcctaagg
attgttacacccgactttggtgacctgactagtcaggagcaacaaatggaaggaactttt
aggtacatgcatgaaagattgcggacacatgcagagtctgttgctttctttggtggtggt
tctagagagagagagatgattgacatgaagtttggagcactttttaaccattcaatgcta
cttcttaggaagagatggttgtttggtattatagatgacttcatcacaaagcaacttcct
cataatgtcacttggggattgagcttgctgtatgccatggagcataagggtgatcgagcc
ttgacttcaactcaaggtgaactggcgcatgccttacgattcttggcatctgttgtatct
cagagctttttggcatttggtgatattcttgagctgcataggaaattcgttgagctgtct
ggtggtatcaacagaatttttgaacttgaagagcttctggaaactgatcatcatggagaa
tacaatggctctttaagatctaaatctgccgaactctcagatgatattatttctttctcc
aaggtggatataattacaccaggtcagaaagttctggctagacagttagagtgtgaaatt
gttcctgggaagagcctgcttgttacaggtccaaatggaagtggaaaaagttcgatcttc
agagtccttcgaggactttggcctgtggtcagcggaaacctcattaaaccttaccaagaa
gttgattataaatcccagtgtcgtcttttttatgtgcctcagcgaccatatacatgctta
ggaactctccgagatcaaataatatatcctctctcttgtgatgaggcagagaaaaggttg
ctatatttagctgaagaaggtgaagaatcaaatggtgccacaaactttttggataagcat
ctgaggtctatcctggagaaggttaaattactatatctcttggaaagagaaggcggatgg
gatactagccaaaactgggaagacattttatctcttggggaacaacaacgtctaggcatg
gcacgattgttcttccacaagccccagttcggtgtcctggatgaatgcaccaatgcaaca
agtgttgatgttgaagagcacctttataagctggcaactgaatccgggattaccgttata
acatcctcacagcgtcctgctttgataccataccactcagtggagttaagattaattgac
ggggagggtaaatgggagcttcgtacaattcagcagtga
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integrated database retrieval system
