Shewanella halifaxensis: Shal_2088
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Entry
Shal_2088 CDS
T00654
Name
(GenBank) pyruvate carboxyltransferase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00362
Benzoate degradation
shl00621
Dioxin degradation
shl00622
Xylene degradation
shl01100
Metabolic pathways
shl01120
Microbial metabolism in diverse environments
shl01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shal_2088
00622 Xylene degradation
Shal_2088
00621 Dioxin degradation
Shal_2088
Enzymes [BR:
shl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
Shal_2088
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
Shal_2088
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Gene cluster
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Motif
Pfam:
HMGL-like
DmpG_comm
Motif
Other DBs
NCBI-ProteinID:
ABZ76647
UniProt:
B0TTS9
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Position
complement(2513451..2514473)
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AA seq
340 aa
AA seq
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MNLTGKKVILHDMSLRDGMHARQHQITLKEMVDVATGLDAAGVPLIEVTHGDGLGGASLN
YGFPAHTDEEYLSAVIPKMKQAKVSALLLPGIGTVDHLRMAHQLGVNTIRVATHCTEADV
SGQHIALSRDLGLDTVGFLMMAHMVSPEKLLEQAKLMESYGANCIYCTDSAGYMLPGDVT
SHIERLRGELKSDTQIGFHGHHNMGMSIANSLAAIEAGAERIDGSVAGLGAGAGNTPLEV
FVAVLERMQVHHGVNLYDIMDVAEDLVTPMMDQPIRIDRDALTLGYAGVYSSFLLFAQRA
EKKYGVPARDILLELGRRGTVGGQEDMIDDTAMNMARELA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaacgggaaaaaaagttattttacacgacatgtcattaagagatggcatgcat
gctcgccaacatcaaattactttgaaagagatggttgatgtagcaacaggactcgatgct
gcgggggtacctttaatcgaagttacccatggtgatggccttggcggtgcatcgctaaat
tatggtttccctgcgcacactgatgaagaatacttaagcgccgtgatccctaaaatgaag
caagcaaaggtttctgcactgttattaccagggatcggtaccgtcgatcatttacggatg
gcacatcaacttggtgttaatacaatccgagttgctacccactgtactgaagccgatgta
tctggacagcacattgcgttatcaagagatttaggccttgatactgtaggatttcttatg
atggctcatatggttagccctgagaagttgcttgagcaagccaaacttatggagtcctat
ggcgcaaattgtatttactgcaccgactctgcaggttatatgctaccaggagacgttact
tcgcatattgagcgattacggggcgagcttaaaagcgatacgcaaattggttttcatggc
caccataatatggggatgagtatcgccaactcccttgcagctattgaagctggcgccgaa
cgtatagatggttccgttgctggtttgggtgccggagctggaaacacaccattagaggta
ttcgtggccgtacttgaacgtatgcaggtccaccacggggttaacttatatgacattatg
gacgtagcagaagatctcgttaccccaatgatggaccaaccgataagaatcgacagagat
gcgctaactttaggctatgctggagtctattcatcattcttattgttcgcacaaagagcc
gaaaaaaaatatggggttccagcaagagatatattgcttgagctgggtagacgtggcact
gttggcggccaagaagatatgattgatgataccgcaatgaatatggcaagagagcttgcc
taa
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