Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5380
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Entry
SHJGH_5380 CDS
T02531
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHJGH_5380
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sho01007
]
SHJGH_5380
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sho03016
]
SHJGH_5380
Enzymes [BR:
sho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SHJGH_5380
Amino acid related enzymes [BR:
sho01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SHJGH_5380
Transfer RNA biogenesis [BR:
sho03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SHJGH_5380
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
DUF2387
Nudix_N_2
Motif
Other DBs
NCBI-ProteinID:
AGF65043
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Position
6115468..6117207
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AA seq
579 aa
AA seq
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MPIVAQSTETTDWVSRFADEVIEESERRAPGKPVVVASGLSPSGPIHLGNLREVMTPHLV
ADEIRRRGHEVRHLISWDDYDRYRKVPAGVAGVDESWAEHIGKPLTSVPAPKGSPHPNWA
EHFKAAMIESLAQLGVEFDGISQTEQYTSGAYREQILHAMKHRNEIDAILDQYRTKKAPK
KQQQKPRDEAELEAEEGSGAASEDDGSSGSAGYFPYKPYCGNCGKDLTTVTSYDDDSTEL
SYTCTACGFAETVRLSEFNRGKLVWKVDWPMRWAYEGVIFEPSGVDHSSPGSSFQVGGQI
VGIFGGEQPIGPMYAFVGISGMAKMSSSRGGVPTPADALKIMEPQLLRWLYARRRPNQSF
KIAFDQEIQRLYDEWDKLAAKVAEGSALPGDVAAYTRAVGTAAGELPKTPRPLPYRTLAS
VADITAGHEDQALRILSELDPEQPLASLDEVRPRYDRAEAWINTHVPADQRTIVRDEPDA
ELLKSLDEASQQSVRLLLDGLADHWSLDGLTHLVYGVPKVQAGFSADATPKELPAEIKTA
QRTFFALLYHLLVGRDTGPRLPTLLLAVGQDRVRRLLGE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcgtggctcagagcaccgagaccaccgactgggtctcccgtttcgcggatgag
gtcatcgaggagtcggagcgccgggccccgggcaaaccggtcgtcgtcgcgtccggactc
tccccctccggtcccatccacctcggcaacctccgcgaggtcatgaccccgcacctcgtc
gccgacgagatccgccgccgcggccacgaggtccggcacctgatctcctgggacgactac
gaccggtaccgcaaggtcccggccggcgtcgccggcgtcgacgagtcctgggccgagcac
atcggcaagccgctgacctccgtcccggcgccgaagggctcgccgcacccgaactgggcc
gagcacttcaaggccgcgatgatcgagtcgctggcccagctcggcgtcgagttcgacggc
atcagccagaccgagcagtacacctccggcgcctaccgcgagcagatcctgcacgccatg
aagcaccggaacgagatcgacgcgatcctcgaccagtaccgcacgaagaaggccccgaag
aagcagcagcagaagccccgggacgaggccgaactggaggccgaggagggctccggcgcc
gcgtccgaggacgacggcagctccggctccgccgggtacttcccgtacaagccgtactgc
ggcaactgcggcaaggacctgacgacggtcacctcctacgacgacgacagcaccgagctg
tcgtacacctgcaccgcctgcggcttcgccgagaccgtccggctcagcgagttcaaccgc
ggcaagctggtctggaaggtcgactggccgatgcgctgggcctacgagggcgtgatcttc
gagcccagcggagtcgaccactcctcgccgggctccagcttccaggtcggcggccagatc
gtcggcatcttcggcggcgagcagcccatcggccccatgtacgccttcgtcggcatctca
ggcatggcgaagatgtcctcctcgcggggcggggtccccaccccggccgacgcgctgaag
atcatggagccgcagctcctgcgctggctgtacgcccgccgccgccccaaccagtccttc
aagatcgccttcgaccaggagattcagcggctctacgacgagtgggacaagctcgccgcc
aaggtcgccgaaggctccgccctgcccggcgacgtggccgcgtacacccgcgccgtcggc
accgccgccggtgaactgccgaagacgccgcgaccgctgccgtaccgcacgctcgcctcc
gtcgccgacatcaccgccggacacgaggaccaggccctgcgcatcctctccgagctcgac
ccggagcagccgctggcctccctggacgaggtacggccccggtacgacagggccgaagcc
tggatcaacacgcacgtccccgccgaccagcggaccatcgtgcgcgacgagcccgacgcc
gagctgctgaagtccctcgacgaggcctcccagcagtccgtgcgcctgctgctcgacgga
ctcgccgaccactggtcgctcgacggactgacccacctcgtgtacggcgtgcccaaggtg
caggccgggttctccgccgacgccacgcccaaggaactgcccgccgagatcaagaccgct
cagcggacgttcttcgccctcctctaccacctgctcgtcggccgcgacaccgggccccgg
ctgcccacgctgctgctggccgtgggacaggaccgggtgcggcgcctgctcggcgagtag
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