Sturnira hondurensis: 118974746
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Entry
118974746 CDS
T07222
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
shon
Sturnira hondurensis
Pathway
shon03020
RNA polymerase
shon03420
Nucleotide excision repair
shon05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118974746 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
118974746 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
118974746 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shon03021
]
118974746 (POLR2A)
03400 DNA repair and recombination proteins [BR:
shon03400
]
118974746 (POLR2A)
Enzymes [BR:
shon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118974746 (POLR2A)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118974746 (POLR2A)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118974746 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
118974746
NCBI-ProteinID:
XP_036884273
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGILSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggaattctgagtccggatgaactgaaacgaatgtctgtaacagagggtggt
atcaaataccctgagacaactgaaggaggtcgccccaagcttgggggccttatggatccg
aggcagggggtgattgagcggactggccgttgccaaacatgcgcaggaaacatgacagag
tgtcctggccacttcggccacattgagctggccaaacctgtgtttcacgtgggcttcctg
gtgaagacgatgaaagttttgcgttgtgtctgctttttctgctccaaattgcttgtggac
tctaacaacccaaagatcaaggacatcttggccaagtccaaggggcagcccaagaagcgg
cttacacatgtttatgacctctgcaagggcaaaaacatctgcgagggtggggaggagatg
gacaacaagtttggtgtggagcagcctgaaggcgatgaggatttgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccggcgctcaggtctggagctttatgca
gagtggaagcatgtcaacgaggactctcaggagaagaagatcctgctgagtcctgagcga
gtgcatgagatctttaaacgcatctcagatgaggagtgttttgtgctgggcatggagcca
cgctatgcccgaccagagtggatgattgtcacagtgctgcctgttccacccctctcggtg
cgacccgctgttgtgatgcagggttctgcccgcaaccaggatgacctgactcacaaactg
gccgacattgtgaagatcaacaatcagcttcggcgcaatgagcagaacggtgcggcagcc
catgtcattgcagaggacgtgaagctcctccagttccatgtggccaccatggtggacaat
gaactgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttaaagggcaaggaaggcagggtgcgagggaatctgatgggcaagcgagtggac
ttctcggcccgcactgtcatcactcccgaccccaacctctccattgaccaggttggcgtg
cctcgctccattgccgccaacatgacctttgcagagattgtcacccccttcaacattgac
agacttcaggaactagtgcgcaggggtaacagccagtacccaggggccaagtacatcatc
cgagacaatggcgatcgcattgacctgcgttttcaccccaagcccagtgaccttcaccta
cagactggctataaggtggagcggcacatgtgcgacggagacattgttatcttcaaccgg
cagccaactttgcataaaatgtccatgatgggacatcgggtccgcatcctcccctggtct
acttttcgcttgaacctcagtgtgacaaccccgtacaatgctgactttgatggtgatgag
atgaacttgcacctgccacagtctctcgagacacgggcggagatccaggagcttgccatg
gtgccacgcatgattgtcactccccagagcaatcgccctgtcatgggcattgtgcaggac
acgctcactgcagtgcgcaaattcactaagagagatgtcttcctggagcggggtgaagtg
atgaacctgctgatgttcctgtccacatgggacgggaaggtcccacagccagccatcctg
aagccccggcccctgtggacaggcaaacagatcttctcccttatcataccaggtcacatc
aactgtatccgtacccacagcacccatcccgatgatgaggacagtggcccttataagcac
atctcccctggggacactaaagtggtggtggagaacggggagctgatcatgggcattctg
tgtaagaagtctctgggcacatcagctggctctttggtccatatctcttacctagagatg
ggtcatgacatcactcgcctgttctattccaacattcagactgtcattaacaactggctc
ctcatcgagggtcataccattggcattggggactccattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcatcgagaaggcc
cataacaatgagctggagcccacccccgggaacactctgcggcagacatttgagaaccag
gtgaaccgtattctcaacgatgctcgagacaagactggctcctctgctcagaaatctctg
tccgaatacaacaactttaagtctatggttgtatctggagctaaaggttccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggaaggtaagcggatcccgttt
gggttcaagcaccggactctgccgcacttcatcaaggatgactatgggcctgagagccgt
ggctttgtggagaactcctacctagccggcctgacacccaccgagttcttttttcatgcc
atggggggccgcgaagggctcatcgacactgctgtcaagactgctgagacgggatatatc
cagcggcggctgatcaagtccatggagtccgtgatggtgaaatatgatgccactgtgcgg
aactccatcaaccaggtggtgcagctgcgctatggtgaggacggcctggcaggcgagagc
gtggagttccagaacctggctacacttaagccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgaggcgcactctgcaggaggatctggtgaag
gatgtgctgagcaacgcacacattcagaatgagctggagcgagaatttgaaaggatgcgt
gaggatcgggaggtgctcagggtcatcttcccaactggggacagcaaggttgtcctcccc
tgtaacctgctgcgcatgatctggaatgctcagaaaatcttccatatcaaccctcgtctt
ccctctgacctgcaccccatcaaggtggtggagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgacccactgagccggcaggctcaggagaatgccacactgctc
ttcaacattcaccttcgatccacactgtgttcccgtcgcatggctgaggaattccggctc
agcggagaggcctttgactggctgcttggagagattgagtccaagttcaaccaagccatt
gcccatcctggggaaatggtgggcgctctggctgcacagtcccttggagaacccgcaacc
cagatgaccttgaacacctttcactacgctggtgtgtctgccaagaatgtgaccctgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccctcacttact
gtcttcctgttgggtcagtctgctcgagatgctgagagagccaaggacattctgtgccgt
ttggaacatacaacgttgaggaaggtgactgccaacacagccatctactatgaccccaac
ccccagagcacggtggtggcagaggatcaggaatgggtgaatgtctactatgagatgcct
gactttgacgtggcccgaatctctccctggcttttgcgagtggaactggaccggaagcac
atgactgaccggaaactaaccatggagcagattgctgaaaagatcaatgctggttttggc
gatgatttgaattgcatctttaatgatgataatgcagaaaagctggtgctccgtatccgt
atcatgaacagtgatgaaaataagatgcaagaggaagaagaggtggtggacaagatggat
gatgatgttttcctgcgctgcatcgaatccaacatgctgacagacatgaccctgcagggt
atcgagcagatcagcaaggtgtacatgcacttaccacagacagacaataagaagaagatc
attatcacagaggatggggaattcaaggccctgcaagagtggattctggagactgatggc
gtgagcttgatgcgggtgctgagtgagaaggacgtggaccctgtgcgcaccacgtccaat
gatattgtggagatctttacggtattgggtattgaagccgtacggaaggccttggagcgg
gagctgtaccacgtcatctcctttgatggttcctacgttaattaccggcatttggctctc
ttgtgtgataccatgacctgtcgtggccacttgatggccatcacacgacatggagtcaac
cgccaggatactggacctctcatgaaatgctcctttgaggaaacggtggatgtgctcatg
gaagcagctgcccatggagagagcgaccccatgaagggggtatctgagaatatcatgctg
ggccagctagctccagctggcactggctgctttgacctcctactcgatgcggagaagtgc
aagtatggcatggagatccccaccaatatccccggcttgggtgctgctggacccaccggc
atgttcttcggctcagcacccagtcccatgggaggaatttctccagccatgacaccctgg
aatcagggtgcaaccccagcctacggcgcctggtcccccagtgttggaagtggaatgaca
ccaggagcagctggcttctctcccagcgctgcttcagatgccagtggcttcagcccaggt
tactcccctgcctggtctcccacacctggctccccaggctcaccaggcccctcaagccca
tacatcccctcgccaggtggtgccatgtctcccagctactcaccaacatcgcctgcctat
gagccccgctcccctgggggttacacgccccagagtccctcctactcccccacttcacct
tcctactcccctacctctccatcctattctccaaccagtcccaattatagtcccacatca
cccagctactcccccacctctcccagctactcccccacctctccgagctattctcccacc
tctcccagttactctcccacctctcccagttactctccaacttccccaagctactccccc
acatcacccagctactcaccgacttctcccagttactcaccaacatctcccagctactct
cccacctctcccagttactccccaacctcacccagctattctcccacctctcccagctac
tcgccaacatcacccagctattctcccacctctcccagctactcaccaacttctccaagt
tattcacccaccagccctaactactctccaaccagtcccaattacaccccgacatcaccc
agctatagcccaacatcgcccagctactcacctactagtcccaactatacaccaacaagc
cctaactacagcccaacctctccaagctactctccaacgtcacccagctactccccaacc
tcaccaagctattccccttcaagtccacggtatacaccacagtctccaacctataccccg
agttctcccagctacagtcccagctctcccagctacagccctacctcaccaaagtatacc
ccgaccagcccttcctacagccccagctcaccagagtacaccccaacctctcccaagtac
tcacctaccagcccgaaatactcacccacctcccccaagtactcacccaccagccccacg
tattcacctaccaccccgaaatactcaccaacctctcctacttactcaccaacctctcca
gtctatactccaacctcccccaagtactcacctactagccccacttactcacccacctcc
cccaagtactcacccaccagccccacctattcacccacctcccccaaaggctctacctac
tcgcccacttcccctggctactcgcccaccagccctacctatagtctcaccagcccagcc
atcagccccgatgacagtgatgaggagaactga
DBGET
integrated database retrieval system
