Sturnira hondurensis: 118990627
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Entry
118990627 CDS
T07222
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
shon
Sturnira hondurensis
Pathway
shon04064
NF-kappa B signaling pathway
shon04514
Cell adhesion molecules
shon04668
TNF signaling pathway
shon04670
Leukocyte transendothelial migration
shon04933
AGE-RAGE signaling pathway in diabetic complications
shon05143
African trypanosomiasis
shon05144
Malaria
shon05417
Lipid and atherosclerosis
shon05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
118990627 (VCAM1)
04668 TNF signaling pathway
118990627 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118990627 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
118990627 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
118990627 (VCAM1)
05143 African trypanosomiasis
118990627 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
118990627 (VCAM1)
05418 Fluid shear stress and atherosclerosis
118990627 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118990627 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
shon04090
]
118990627 (VCAM1)
04091 Lectins [BR:
shon04091
]
118990627 (VCAM1)
CD molecules [BR:
shon04090
]
Proteins
118990627 (VCAM1)
Lectins [BR:
shon04091
]
I-type lectins (Siglecs)
118990627 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set
V-set
C2-set_2
ICAM_N
ICAM1_3_5_D2
Ig_6
Ig_4
C1-set
Ig_5
Adhes-Ig_like
TrkA_C
Motif
Other DBs
NCBI-GeneID:
118990627
NCBI-ProteinID:
XP_036907212
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MPGKMAVIFGVSNILWMVLAASQAFKIEITPESQIVAQINASVSLTCRATGCEAPSFSWR
TQIDSPLNGKVRREGSTSVLTMDPVSFGNEHSYLCTATCGARKEEKAVKVLIYSFPRDPE
IQLSGPLEVGKPVRATCLVRDVYPFERLEIDLLKGDRLLKNQEFLESAETKSLETKGLEV
TFTPTNADIGEALVCQAQLHINEIDANLRKRTMTKTLQVHISPRNTVVSVSPSTRLQEGG
SVTMTCSSEGLPAPQITWSKTSDNGQPQLLSGNGTLTLIAMRVEDSGIYVCEGVNPVGRD
RKEVELIVQEKPFTVEISPGPQVAAGIGDSVVLTCGATGCAVPSFSWRTQIDSPLHGQVR
REGATSTLTLSPVSFEHERSYLCTVTCGRRKQEKTIKVDLYSFPRDPEIEVIGGPVDGEP
ATVRCSVPDVYPLDRLEIRLLKGERLVESKNFLEAEEKDSLKTGSVEMTFIPTVDDTGKV
LVCQAKLQIDEMEFEPKQRQSTRTLHVQIAPRNMTVLVSPSSTLEEGQSVNMTCSGDGLP
APKIQWSRQLRDGSLQFLSENATLTLTSTRRGDSGIYVCEGRNQAGTGRKEVELIIQVTP
PDMQLRASPSERVQEGDTVTIYCTCGNYPKTWIILKKKAETGDTVLKSVEGAYIIPKAQL
EDAGVYECESKSELGWQFRSITLDVKGRERDYVSPGFLMLYCASSLLIPAIGTIVYFARR
ANMKGSYSLVDAQKSKV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggccgtgatctttggggtctcaaacatactttggatggtgctggcg
gcttctcaagcgtttaaaatcgagatcacccccgaatcccaaatcgtggcgcagatcaac
gcctccgtctcgctgacctgcagggccacgggctgcgaggccccctctttctcctggaga
acccagatcgacagcccgctgaacgggaaggtgaggagagaggggagcacatccgtgctg
accatggaccccgtgagcttcgggaacgagcactcatacctgtgcaccgccacctgcggg
gccaggaaagaagagaaagccgtcaaggtgctcatttactctttccccagggacccggag
attcagctgagtggccccctggaggttggaaagcccgtcagggccacgtgtttggtgcgt
gacgtttacccgttcgaaaggctggagatagatttgctgaagggcgaccgtctcttgaaa
aatcaggagtttctggagtctgcagagacgaagtccctggaaaccaagggcttggaagtg
accttcactcctaccaatgcagatattggggaagctcttgtctgccaggctcaactacac
atcaatgaaatcgatgcaaacctccgaaagaggacgatgacaaaaaccctgcaagtccac
atctcgcccaggaacaccgtggtctctgtgagtccctccacgaggctgcaggaagggggc
tccgtgaccatgacgtgctccagcgaaggcctgcccgccccgcagatcacctggagcaag
acgtcagacaacgggcaaccgcagctcctttctggaaacggaacgctcactctcattgct
atgagggtggaagattctggcatttatgtgtgtgagggcgttaatccagttgggagagac
agaaaagaggtggaattgattgttcaagaaaaaccgttcactgtcgagatctcccctgga
ccccaggttgccgctgggatcggtgactcagtcgtgctgacgtgtggtgccacgggctgt
gcggtcccctctttctcctggagaacccagatagacagccctctgcacgggcaggtgagg
cgtgagggggccacgtccacgctgaccctgagccccgtgagtttcgagcacgaacgttct
tacctgtgcaccgtgacctgtggacgcaggaaacaggaaaagaccattaaggtggacctc
tactcattccccagagacccggaaatcgaggtgattggcgggccagtggatggggagccg
gccacagtgaggtgcagcgttcctgatgtgtaccctctggaccggctggagattcggcta
ctgaagggggagaggctcgtggagagtaaaaacttcttggaggccgaggagaaggactcc
ctcaagaccgggagtgtggagatgaccttcatccccaccgtggacgataccggcaaagtg
cttgtttgtcaggctaagttacaaattgatgaaatggagtttgaacccaaacaaaggcag
agcacacggacgcttcatgttcaaattgcccccaggaatatgaccgtcttggtcagcccc
tcctccaccctggaggagggtcagtctgtgaacatgacctgctctggcgatggccttccc
gctccgaaaatccagtggagcaggcagctacgtgacgggagcctgcagtttctctctgag
aacgcaactctcaccttgacctctacgagaaggggagattctggcatttacgtgtgcgaa
gggcgtaaccaggctgggacgggcagaaaggaagttgaactaattatccaagtcactcca
ccagacatgcaacttagagcttctccttctgagagggtccaggaaggagacactgtcact
atctactgtacatgtggaaattaccctaaaacatggataatcctgaagaaaaaagcggag
acaggagacaccgtgctaaagtctgtagaaggtgcctatatcatccccaaggcccagtta
gaggatgcgggagtctacgaatgcgaatctaagagcgagcttggctggcagttcagaagt
ataacacttgatgttaaaggcagagaaagggactacgtttcccctggatttctcatgctc
tattgcgcctcctccctcctcatccctgccatcggcacgatcgtttacttcgcccggaga
gccaacatgaagggctcctacagccttgtagacgcacagaaatccaaagtgtag
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