Shewanella putrefaciens 200: Sput200_1286
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Entry
Sput200_1286 CDS
T02015
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp00730
Thiamine metabolism
shp01100
Metabolic pathways
shp01240
Biosynthesis of cofactors
shp04122
Sulfur relay system
Module
shp_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sput200_1286
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Sput200_1286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shp03016
]
Sput200_1286
Enzymes [BR:
shp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Sput200_1286
Transfer RNA biogenesis [BR:
shp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sput200_1286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
ADV53757
UniProt:
E6XQD3
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All DBs
Position
1442574..1444028
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIMVMVPKHKPE
LAQAFGERLACIPGIAHVVQVDEYSFESVDDIYQQALPVYRDQIAGKTFCVRVKRTGDHD
FNSIDVERYVGGGLNQFTDAIGVRLKNPDVTVNLEIDRDKLYMVTKRIEGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERLGIQALVTGESLGQVSSQTL
TNLNVIDRCTELLILRPLIAMDKQDIINESRRIGTEDFAKSMPEYCGVISQKPTVKAVLA
KVEAEEKKFSEDLIDQIVAQAVTIDIREIAEQMDTRITETETVIAIETNEVVIDIRAPEE
EEHKPLNIEGVEVKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtatccagaaatcatgatgaagagcaaacctgtgcggatg
cgcttcaccaaaatgctcgaaactaatatccgtaatgtgcttaaaaaagttgatgaagat
gccaaagtgcagcgtcaatgggaccgaattatggtgatggtgccaaagcataagcctgaa
ttagctcaggcctttggtgagcgtcttgcttgtattcctggaattgctcacgtcgtacag
gttgatgagtatagctttgaatccgtggatgatatttatcaacaagctctaccggtttac
cgcgatcaaattgctggtaaaaccttctgtgtacgggttaagcggactggcgatcacgac
tttaattccattgatgtggagcgttatgtggggggcggtttaaatcagtttaccgatgcg
attggggtgcgtttaaagaatcctgatgtcaccgttaatctggaaattgaccgcgacaaa
ctttacatggtgactaagcgtatcgagggtttaggtggtttccctatggcaacacaagaa
gatgtgttgtccttgatatccggcggttttgactcaggtgtctctagctatcaatttatc
aaaaagggtgctcgtacccattattgcttcttcaatttaggtggcgcgcagcacgaaata
ggtgttaagcaagtggcttatcatctttggaaaacctatggtgaatcccataaagttaaa
tttgtttcagttccctttgagcctgtggttgccgaaattttagagaaaatcgacaatggt
caaatgggcgttgtattgaaacgtatgatgatgcgcaccgcggcaagaattgctgaacgt
cttggcatccaagctttggttaccggtgaaagtttaggacaagtatcgagtcaaacctta
accaacttgaacgtcattgatcgttgtactgaactgctgatcttgcgcccattaatcgca
atggataaacaggatatcatcaacgaaagtcgcaggatcggtaccgaagattttgctaaa
tcaatgccagagtattgtggtgttatctcacaaaaacccaccgtcaaggcagtactcgcc
aaggttgaagcggaagagaagaagttctctgaagatttaatcgaccaaattgtcgcacag
gccgtcaccattgatattagagagatagcagaacaaatggacactcgaattaccgagact
gaaactgtcatcgccattgagactaatgaagtggttatcgatatccgagcaccagaagaa
gaggaacataaacctcttaatattgaaggtgttgaggtaaagcgaatcccattttttaaa
ttagcgacccagtttgccgatctcgacaagcaaaagacctatttgctctactgtgagcga
ggtgtcatgagtaagctgcaggcgctatatttaattgaacagggatataccaacgtaaaa
gtgtatcgcccataa
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