Sarcophilus harrisii (Tasmanian devil): 100920008
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Entry
100920008 CDS
T02286
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04014
Ras signaling pathway
shr04015
Rap1 signaling pathway
shr04020
Calcium signaling pathway
shr04024
cAMP signaling pathway
shr04080
Neuroactive ligand-receptor interaction
shr04713
Circadian entrainment
shr04720
Long-term potentiation
shr04724
Glutamatergic synapse
shr04728
Dopaminergic synapse
shr05010
Alzheimer disease
shr05014
Amyotrophic lateral sclerosis
shr05017
Spinocerebellar ataxia
shr05020
Prion disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05030
Cocaine addiction
shr05031
Amphetamine addiction
shr05033
Nicotine addiction
shr05034
Alcoholism
shr05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100920008 (GRIN2A)
04015 Rap1 signaling pathway
100920008 (GRIN2A)
04020 Calcium signaling pathway
100920008 (GRIN2A)
04024 cAMP signaling pathway
100920008 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100920008 (GRIN2A)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100920008 (GRIN2A)
04728 Dopaminergic synapse
100920008 (GRIN2A)
04720 Long-term potentiation
100920008 (GRIN2A)
09159 Environmental adaptation
04713 Circadian entrainment
100920008 (GRIN2A)
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
100920008 (GRIN2A)
09164 Neurodegenerative disease
05010 Alzheimer disease
100920008 (GRIN2A)
05014 Amyotrophic lateral sclerosis
100920008 (GRIN2A)
05017 Spinocerebellar ataxia
100920008 (GRIN2A)
05020 Prion disease
100920008 (GRIN2A)
05022 Pathways of neurodegeneration - multiple diseases
100920008 (GRIN2A)
09165 Substance dependence
05030 Cocaine addiction
100920008 (GRIN2A)
05031 Amphetamine addiction
100920008 (GRIN2A)
05033 Nicotine addiction
100920008 (GRIN2A)
05034 Alcoholism
100920008 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100920008 (GRIN2A)
Ion channels [BR:
shr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100920008 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
100920008
NCBI-ProteinID:
XP_031800579
Ensembl:
ENSSHAG00000008553
LinkDB
All DBs
Position
1:304991077..305497815
Genome browser
AA seq
1503 aa
AA seq
DB search
MGRLGYWALLVLPALLVWRSPARARAEKGPPALNIAVLLGRSHDVTERDIRNLWGRELAS
ELALDVNVVAMLVNLTDPKSLITHVCDLMSGARIHGLVFGDDTDQEAIAQILDFISSQTF
IPILGIHGGASMIMADKDPMSTFFQFGASIQQQATIMMKIMQDYDWHVFSVVTTTFPGYR
DFISFIKTTVDNSFVGWDMQNVITLDTSFGDAKTQIQLKKIHSSVILLYCSKDEAVLILS
EARSLGLTGYDFFWIVPNLVSGNTELIPKEFPSGLISVSYDDWDYSLEQRVRDGLGIITT
AASSMLERYSFIPETKTSCYGQIEKPEVPLHTLHKFMINVTWEGKDLSFTEAGYQVHPRL
VVIVLNKDREWEKVGKWENQTLSLTHAVWPRYKSFADCEPDDNHLSIVTLEEAPFVIVED
IDPLTESCVRNTVPCRKFVKINNSTNEGTNVKKCCKGFCIDILKKLSRTVKFTYDLYLVT
NGKHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSN
GTVSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRSLARGKAPHGPSFTI
GKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQ
VTGLSDKKFQKPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTKFNQKGVEDALVSLK
TGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQ
FVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLF
YWKLRFCFTGVCTDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFNLTGSQSNMLKLLRSA
KNISNMSNLNSSRINSPKRTTDYIQRGSLIMDMVPDKGNLIYSDNRSFHGKDNVFADNMN
ELQTFVANRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVSTESKGNSRPRQLWKKSMESL
RQDSLSQNPVPQQRENGLVENRSHSLKSPRYLPEEVAHSDISEASSRATCHMELENNNKH
HKTKDNFKKRSGASKYPKDCSDVELTYLKTKASSPRDKIYTIDAEKEPSFHIEQPQFIEN
LVIPENVDFPEVYQDPNDNYQKGDATLPVNRTPLHNEDGNVPNNDQYKLFSKHYTLKEKN
SPHSEGSDRYRQNSTHCRSCLSNLPNYTGHYTTRSPYKCDSCLRMGNLYDIDEDQMLQET
TTNPAHSEDTYEQDWVQNNALQFQKKNKLRISRQHSYDNILDKPREIDLGRPSRSISLKD
KERLLEGNLYGSLFSVPSSKLLGNKGSLFSQALEDNKRSKSLFPDHSSDNPFLHSYQDDQ
RLVIGRCPSDSYKHSLPSQVRNDNYLRSSLRSTASSYCSRDSRGHNDTYIPEHVMPYVAN
NNIVYSTPRVLNSCSNRLTAQTRPQNSGPWKESVCPHIRGYLQSRLSSRYGDASGIIGPS
CSW
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgggcagactgggctactgggcgttgctggtgctgccggctctgctggtgtggcgaagc
cctgcacgagctcgcgcggagaaggggcccccggcgttgaacatcgcggtgcttctgggc
cggagccacgatgtaacagagagggatatccgtaacctgtggggccgggagctggcaagt
gagctagcgctcgacgtgaatgtggtggccatgttggtcaaccttacagaccccaagagt
ctcatcacccatgtctgcgacctcatgtctggcgcccgcatccatgggcttgtgtttggg
gatgacacggaccaggaagccatcgcacagatcttggattttatctcctcacagaccttc
atccccatcctggggattcatggtggtgcctccatgatcatggctgataaggacccgatg
tctaccttcttccagtttggagcttccatccagcagcaagccactattatgatgaaaatt
atgcaggattatgactggcatgtcttctctgtggtgactaccacctttcctggctaccgg
gacttcataagcttcatcaagaccacggtagacaacagctttgtcggctgggacatgcag
aatgtgataaccctggatacttcctttggggacgccaaaacacaaattcagctaaagaaa
atccattcctctgtcatcctgctttactgctccaaggatgaagccgttctgattctcagt
gaggctcgctctctgggcctgacgggctacgatttcttttggattgttccaaatttggtt
tctggcaacacagaactcatccccaaagagtttccttcaggcctcatttcagtctcatat
gatgactgggactacagtttagagcaaagagtaagagatgggctggggattatcaccact
gctgcctcctccatgttggaaaggtattcattcattcctgaaaccaagaccagctgctat
ggacaaatagagaaacctgaggttcctctgcataccctacacaaattcatgatcaatgtg
acatgggaaggcaaagacttgtctttcacagaagcagggtaccaagtgcaccccaggtta
gtggtgattgtgttgaacaaggaccgagaatgggaaaaggtggggaaatgggagaaccaa
accctgagtctgacacatgccgtgtggccgagatacaaatcgtttgctgactgtgagccg
gatgataaccatctgagcatcgttactctggaagaagctccatttgtcattgtggaagac
atagacccattgactgagtcctgtgtgcgaaacactgtgccatgtcggaaatttgtcaaa
atcaacaattcaaccaacgaggggaccaatgtaaagaaatgctgcaagggcttctgtatt
gatatcctgaagaagctatctcgtactgtgaagttcacctatgacctctacctggtgacc
aatgggaagcatgggaagaaagtcaataacgtatggaatggaatgattggggaagtggta
taccatcgagcagtcatggcagtagggtctctcacaattaatgaggaacgttcagaagtg
gtggacttttctgttccttttgtggagacaggaatcagcgtcatggtttcacgaagtaat
ggcacagtatctccatctgcctttctagaaccttttagtgcttctgtatgggtgatgatg
ttcgtgatgctcctcattgtgtctgccatggctgttttcatatttgaatacttcagtcca
gttggctataacaggagcttagccagagggaaagctccacatggaccttcttttactatt
ggaaaagctatatggttgctctggggcctggtcttcaataattctgtgcctgttcagaac
ccgaaagggaccaccagcaaaatcatggtgtctgtttgggccttctttgcggtcattttc
ctggccagttacactgccaacctggctgccttcatgattcaagaggaatttgttgaccag
gtgactggcctaagtgataaaaagtttcagaagcctcatgattattcccccccttttcgg
tttggcacagttcctaatgggagcacagaaaggaacatcaggaataattacccttacatg
catcagtatatgaccaaattcaatcagaaaggagttgaggatgcactggtcagcttaaaa
acaggaaagttggatgctttcatctatgatgctgcagtgctgaattacaaggctgggaga
gatgaaggctgcaaactggtgacaattgggagtggctatatctttgctactactgggtat
ggcatcgccctccagaaaggctctccatggaagaggcagatcgacctggcccttcttcag
tttgttggtgatggagagatggaagagctggagacactttggttgacaggaatctgccac
aatgagaagaatgaagtgatgagcagccaactggatattgacaacatggcgggagttttc
tacatgcttgctgctgctatggcactcagcctcatcacctttgtctgggaacatttgttt
tactggaaactcaggttttgcttcactggagtatgcacagacaggccaggactgttgttc
tccatcagcaggggcatttacagctgcattcatggagtgcacattgaggagaaaaagaag
tcaccagattttaatttaactggctcccagagcaacatgttaaaactcttacggtcagcg
aaaaatatttctaacatgtccaacctgaactcctccagaattaattcccccaaaagaaca
actgattatatccaaagaggctccctcatcatggatatggtcccagataaagggaatttg
atatactctgataatagatcttttcatggaaaagacaatgtttttgcggacaacatgaat
gaacttcagacatttgtggccaataggcataaagacaacctcaataattatgttttccag
ggacagcatcctctcaccttgaatgagtccaatcctaatacagtggaagttgctgtgagc
acagagtccaaagggaactctagaccgcggcaactttggaaaaagtccatggagtccttg
cgccaagattcactgagccagaacccagtccctcaacagcgggagaatggcttggtagaa
aacagatctcactctctgaagagtcccaggtaccttcctgaagaggtggctcactctgac
atctcagaagcttcaagtcgggccacatgccacatggaacttgagaacaacaacaaacac
cacaagaccaaggacaattttaaaaaaaggtctggggcctccaaatatccgaaggactgc
agtgatgttgagctcacctacctgaaaaccaaagcaagctcccccagggacaagatatat
accattgatgctgaaaaggagcccagtttccacatagaacaaccccagtttattgaaaac
cttgtcattcctgagaatgtggatttccctgaagtataccaggatcccaatgacaactat
caaaagggggatgctacacttcctgtcaacaggactcctttgcacaatgaagatggcaat
gtccctaataatgaccagtacaaactcttttccaagcattatactttgaaggaaaaaaac
tctccccacagtgaggggagtgacagatacaggcagaactctactcactgtaggagttgt
ctctccaacctgcccaactacactggtcattacactactcggtccccctacaaatgtgat
tcctgcctgagaatgggtaacctctatgatatcgatgaggaccagatgctgcaggaaacc
acaaccaaccctgcccactctgaggatacatacgagcaagactgggttcagaacaatgcc
cttcagttccagaagaaaaataagttgagaattagccggcaacattcttatgacaacatt
ctggacaaacccagggagattgaccttggaagaccctctaggagcataagcttaaaggac
aaggagagactcttggaagggaatttgtatggaagcttgtttagtgtcccctccagcaaa
ctgttggggaacaagggctctcttttctcccaagcactggaagacaataagaggagcaaa
tctctcttcccagaccactcctcggataaccccttccttcactcctaccaagatgaccag
cggctggtcattgggagatgcccctctgactcttataaacactcattgccctcccaagtg
agaaatgacaactacttgaggtcttccctcagatcaacagcatcatcgtactgttccagg
gacagccggggccacaacgacacatacattcccgagcatgtgatgccttatgtggcaaat
aataatattgtatactctacccccagggtcctcaactcctgcagcaatagactcacagcc
caaaccagaccccagaactcagggccctggaaagaatctgtatgtccgcacatccgaggc
taccttcagtctaggctgtcatcaagatatggagacgcatctggaataataggccccagc
tgttcctggtga
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integrated database retrieval system