KEGG   Sarcophilus harrisii (Tasmanian devil): 100922600
Entry
100922600         CDS       T02286                                 
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X3
  KO
K05208  glutamate receptor ionotropic, NMDA 1
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04014  Ras signaling pathway
shr04015  Rap1 signaling pathway
shr04020  Calcium signaling pathway
shr04024  cAMP signaling pathway
shr04080  Neuroactive ligand-receptor interaction
shr04713  Circadian entrainment
shr04720  Long-term potentiation
shr04724  Glutamatergic synapse
shr05010  Alzheimer disease
shr05014  Amyotrophic lateral sclerosis
shr05016  Huntington disease
shr05017  Spinocerebellar ataxia
shr05020  Prion disease
shr05022  Pathways of neurodegeneration - multiple diseases
shr05030  Cocaine addiction
shr05031  Amphetamine addiction
shr05033  Nicotine addiction
shr05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    100922600 (GRIN1)
   04015 Rap1 signaling pathway
    100922600 (GRIN1)
   04020 Calcium signaling pathway
    100922600 (GRIN1)
   04024 cAMP signaling pathway
    100922600 (GRIN1)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100922600 (GRIN1)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    100922600 (GRIN1)
   04720 Long-term potentiation
    100922600 (GRIN1)
  09159 Environmental adaptation
   04713 Circadian entrainment
    100922600 (GRIN1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100922600 (GRIN1)
   05014 Amyotrophic lateral sclerosis
    100922600 (GRIN1)
   05016 Huntington disease
    100922600 (GRIN1)
   05017 Spinocerebellar ataxia
    100922600 (GRIN1)
   05020 Prion disease
    100922600 (GRIN1)
   05022 Pathways of neurodegeneration - multiple diseases
    100922600 (GRIN1)
  09165 Substance dependence
   05030 Cocaine addiction
    100922600 (GRIN1)
   05031 Amphetamine addiction
    100922600 (GRIN1)
   05033 Nicotine addiction
    100922600 (GRIN1)
   05034 Alcoholism
    100922600 (GRIN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:shr04040]
    100922600 (GRIN1)
Ion channels [BR:shr04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   100922600 (GRIN1)
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 Ion_trans_2 Peripla_BP_6 DUF6724
Other DBs
NCBI-GeneID: 100922600
NCBI-ProteinID: XP_003757591
Ensembl: ENSSHAG00000009685
LinkDB
Position
2:247644782..247683109
AA seq 943 aa
MSTMRLLLLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRVYSWNHIILIVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFEPGTKNVTALLKEAQELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIFNGSHVLPNDRKIIWPGGETEKPEGYEMSTRLK
IVTIHQEPFVYVKPALDGETCNEDLTINGEKIKKVTCTGPNDTHPGANRHTILQCCYGFC
IDLLIDLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgagcacgatgcgtctactgttgctcgccctgctcttctcttgttccttcgcccgcgct
gcctgcgaccccaagatcgttaacattggcgcagttctgagcacccgaaaacatgaacag
atgtttcgcgaggctgtgaaccaggccaacaaacggcatggatcctggaagatacagctc
aatgctacctcggttacccacaagcccaatgccatccagatggccttgtctgtgtgtgaa
gacctcatctccagccaggtctacgcaatcttagttagtcacccacctacccccaacgac
cacttcactccaacccccgtctcctacacagccggcttctaccgcatccccgtcctgggg
ctcaccacccgcatgtccatctactctgacaagagcatccacttgagcttcctccggact
gtgcctccatactcccaccaatcaaatgtctggtttgaaatgatgcgtgtctacagctgg
aaccacatcatcctcattgtcagtgacgaccacgagggccgggcagcccaaaaacgccta
gaaaccctcctggaggaacgggagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggcagagaaggtgctgcagtttgaacct
gggaccaagaatgtgacagcgttattgaaagaagcgcaagagctggaggcccgagtcatc
atcctctcagccagcgaggatgatgctgctactgtgtaccgggcagccgcaatgctgaac
atgacaggctctgggtacgtgtggcttgtaggcgagcgggagatctcagggaatgctctc
cgctacgcccctgatggtattattggtctccagctgataaatggaaagaatgaatctgca
cacatcagtgatgctgtgggtgtagtagcccaagctgtgcatgagctttttgaaaaagag
aatatcactgatcccccccgtggctgtgttggcaataccaacatctggaagactgggccc
ctctttaaaagggtgctgatgtcttctaagtactcagaaggtgtgactggccgagtggaa
ttcaatgaagatggggacaggaagtttgccaattacagcatcatgaacctgcagaaccga
aagttggtgcaagtagggattttcaatggaagccatgtcctacctaatgaccgaaagatc
atttggccaggtggggagactgagaaaccagaaggatatgaaatgtcaaccagattaaag
attgtcactatccaccaggaaccttttgtgtatgtgaaaccagctctagatggtgaaacc
tgtaatgaagatctcacaatcaatggggagaagataaaaaaggtcacttgcacaggccca
aatgacacccatccaggcgccaaccgtcacactatactccagtgctgctatggtttctgc
attgacctgctcatcgacctagccaaaacaatgaacttcacctatgaggtccatctggtg
gctgatggcaagtttggcactcaggagcgggtgaacaatagcaacaaaaaggagtggaat
gggatgatgggggagctactgagtggacaggcggacatgattgtggccccactgaccatc
aacaatgagcgggcccagtacattgagttctccaagcccttcaaataccagggactgacc
atcctggtgaagaaggaaatccctaggagtacactggactcattcatgcagcccttccag
agcacattgtggctgctggttggactctctgtacatgtagtggcggttatgctctacctg
ctggaccggtttagcccctttggccgattcaaagtcaacagtgaggaagaagaagaagat
gcactgaccctctcctcagctatgtggttctcctggggggtcctgctcaactctgggatt
ggagaaggtgccccccgaagtttctcagcccgaatcctgggcatggtttgggctggcttt
gccatgatcatcgttgcctcctacactgccaatctggcagccttcctggtgctggaccgt
ccagaagagcgtatcacgggcatcaatgaccctcgactacggaacccctcagacaagttc
atctatgccacggtgaaacagagctctgtggacatctacttccggcggcaggtagagctg
agcaccatgtaccggcacatggagaaacacaactatgagagtgctgcagaagccatccag
gctgtgcgggacaacaagctccacgccttcatctgggattctgccgtgctggagtttgaa
gcctcacagaagtgtgacctggtgaccacaggagaactcttcttccgctctggcttcggc
attggaatgcgcaaagacagcccctggaagcagaatgtctccctggccatcctcaagtcc
cacgagaacggctttatggaggatctagacaagacgtgggttcgataccaggagtgcgac
tcccgcagcaatgctccagctactcttaccttcgagaacatggctggagtatttatgttg
gtggccggtgggatcgtggccggaatcttcctgattttcattgagatcgcttacaagaga
cacaaagatgcccgcaggaagcagatgcagttggcctttgcagcggtgaatgtgtggagg
aaaaacctacaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgcagtaccatcccactgatatcacagggcaactcaacctctcagatccctcggtgagc
accgtggtgtga

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