Sarcophilus harrisii (Tasmanian devil): 100922600
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Entry
100922600 CDS
T02286
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X3
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04014
Ras signaling pathway
shr04015
Rap1 signaling pathway
shr04020
Calcium signaling pathway
shr04024
cAMP signaling pathway
shr04080
Neuroactive ligand-receptor interaction
shr04713
Circadian entrainment
shr04720
Long-term potentiation
shr04724
Glutamatergic synapse
shr05010
Alzheimer disease
shr05014
Amyotrophic lateral sclerosis
shr05016
Huntington disease
shr05017
Spinocerebellar ataxia
shr05020
Prion disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05030
Cocaine addiction
shr05031
Amphetamine addiction
shr05033
Nicotine addiction
shr05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100922600 (GRIN1)
04015 Rap1 signaling pathway
100922600 (GRIN1)
04020 Calcium signaling pathway
100922600 (GRIN1)
04024 cAMP signaling pathway
100922600 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100922600 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100922600 (GRIN1)
04720 Long-term potentiation
100922600 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
100922600 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100922600 (GRIN1)
05014 Amyotrophic lateral sclerosis
100922600 (GRIN1)
05016 Huntington disease
100922600 (GRIN1)
05017 Spinocerebellar ataxia
100922600 (GRIN1)
05020 Prion disease
100922600 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
100922600 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
100922600 (GRIN1)
05031 Amphetamine addiction
100922600 (GRIN1)
05033 Nicotine addiction
100922600 (GRIN1)
05034 Alcoholism
100922600 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100922600 (GRIN1)
Ion channels [BR:
shr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100922600 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
100922600
NCBI-ProteinID:
XP_003757591
Ensembl:
ENSSHAG00000009685
LinkDB
All DBs
Position
2:247644782..247683109
Genome browser
AA seq
943 aa
AA seq
DB search
MSTMRLLLLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRVYSWNHIILIVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFEPGTKNVTALLKEAQELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIFNGSHVLPNDRKIIWPGGETEKPEGYEMSTRLK
IVTIHQEPFVYVKPALDGETCNEDLTINGEKIKKVTCTGPNDTHPGANRHTILQCCYGFC
IDLLIDLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgatgcgtctactgttgctcgccctgctcttctcttgttccttcgcccgcgct
gcctgcgaccccaagatcgttaacattggcgcagttctgagcacccgaaaacatgaacag
atgtttcgcgaggctgtgaaccaggccaacaaacggcatggatcctggaagatacagctc
aatgctacctcggttacccacaagcccaatgccatccagatggccttgtctgtgtgtgaa
gacctcatctccagccaggtctacgcaatcttagttagtcacccacctacccccaacgac
cacttcactccaacccccgtctcctacacagccggcttctaccgcatccccgtcctgggg
ctcaccacccgcatgtccatctactctgacaagagcatccacttgagcttcctccggact
gtgcctccatactcccaccaatcaaatgtctggtttgaaatgatgcgtgtctacagctgg
aaccacatcatcctcattgtcagtgacgaccacgagggccgggcagcccaaaaacgccta
gaaaccctcctggaggaacgggagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggcagagaaggtgctgcagtttgaacct
gggaccaagaatgtgacagcgttattgaaagaagcgcaagagctggaggcccgagtcatc
atcctctcagccagcgaggatgatgctgctactgtgtaccgggcagccgcaatgctgaac
atgacaggctctgggtacgtgtggcttgtaggcgagcgggagatctcagggaatgctctc
cgctacgcccctgatggtattattggtctccagctgataaatggaaagaatgaatctgca
cacatcagtgatgctgtgggtgtagtagcccaagctgtgcatgagctttttgaaaaagag
aatatcactgatcccccccgtggctgtgttggcaataccaacatctggaagactgggccc
ctctttaaaagggtgctgatgtcttctaagtactcagaaggtgtgactggccgagtggaa
ttcaatgaagatggggacaggaagtttgccaattacagcatcatgaacctgcagaaccga
aagttggtgcaagtagggattttcaatggaagccatgtcctacctaatgaccgaaagatc
atttggccaggtggggagactgagaaaccagaaggatatgaaatgtcaaccagattaaag
attgtcactatccaccaggaaccttttgtgtatgtgaaaccagctctagatggtgaaacc
tgtaatgaagatctcacaatcaatggggagaagataaaaaaggtcacttgcacaggccca
aatgacacccatccaggcgccaaccgtcacactatactccagtgctgctatggtttctgc
attgacctgctcatcgacctagccaaaacaatgaacttcacctatgaggtccatctggtg
gctgatggcaagtttggcactcaggagcgggtgaacaatagcaacaaaaaggagtggaat
gggatgatgggggagctactgagtggacaggcggacatgattgtggccccactgaccatc
aacaatgagcgggcccagtacattgagttctccaagcccttcaaataccagggactgacc
atcctggtgaagaaggaaatccctaggagtacactggactcattcatgcagcccttccag
agcacattgtggctgctggttggactctctgtacatgtagtggcggttatgctctacctg
ctggaccggtttagcccctttggccgattcaaagtcaacagtgaggaagaagaagaagat
gcactgaccctctcctcagctatgtggttctcctggggggtcctgctcaactctgggatt
ggagaaggtgccccccgaagtttctcagcccgaatcctgggcatggtttgggctggcttt
gccatgatcatcgttgcctcctacactgccaatctggcagccttcctggtgctggaccgt
ccagaagagcgtatcacgggcatcaatgaccctcgactacggaacccctcagacaagttc
atctatgccacggtgaaacagagctctgtggacatctacttccggcggcaggtagagctg
agcaccatgtaccggcacatggagaaacacaactatgagagtgctgcagaagccatccag
gctgtgcgggacaacaagctccacgccttcatctgggattctgccgtgctggagtttgaa
gcctcacagaagtgtgacctggtgaccacaggagaactcttcttccgctctggcttcggc
attggaatgcgcaaagacagcccctggaagcagaatgtctccctggccatcctcaagtcc
cacgagaacggctttatggaggatctagacaagacgtgggttcgataccaggagtgcgac
tcccgcagcaatgctccagctactcttaccttcgagaacatggctggagtatttatgttg
gtggccggtgggatcgtggccggaatcttcctgattttcattgagatcgcttacaagaga
cacaaagatgcccgcaggaagcagatgcagttggcctttgcagcggtgaatgtgtggagg
aaaaacctacaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgcagtaccatcccactgatatcacagggcaactcaacctctcagatccctcggtgagc
accgtggtgtga
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integrated database retrieval system