Sarcophilus harrisii (Tasmanian devil): 100923185
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Entry
100923185 CDS
T02286
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4 precursor
KO
K06454
T-cell surface glycoprotein CD4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03250
Viral life cycle - HIV-1
shr03260
Virion - Human immunodeficiency virus
shr04060
Cytokine-cytokine receptor interaction
shr04514
Cell adhesion molecules
shr04612
Antigen processing and presentation
shr04640
Hematopoietic cell lineage
shr04658
Th1 and Th2 cell differentiation
shr04659
Th17 cell differentiation
shr04660
T cell receptor signaling pathway
shr05135
Yersinia infection
shr05166
Human T-cell leukemia virus 1 infection
shr05170
Human immunodeficiency virus 1 infection
shr05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
shr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100923185 (CD4)
03260 Virion - Human immunodeficiency virus
100923185 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100923185 (CD4)
04514 Cell adhesion molecules
100923185 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
100923185 (CD4)
04612 Antigen processing and presentation
100923185 (CD4)
04660 T cell receptor signaling pathway
100923185 (CD4)
04658 Th1 and Th2 cell differentiation
100923185 (CD4)
04659 Th17 cell differentiation
100923185 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100923185 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100923185 (CD4)
05170 Human immunodeficiency virus 1 infection
100923185 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
100923185 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
100923185 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
shr04090
]
100923185 (CD4)
CD molecules [BR:
shr04090
]
Proteins
100923185 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
ig
Tcell_CD4_C
Ig_3
V-set
Ig_2
C2-set
I-set
Receptor_2B4
Ig_6
LapA_dom
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
100923185
NCBI-ProteinID:
NP_001295909
Ensembl:
ENSSHAG00000015840
UniProt:
A0A023J8P9
LinkDB
All DBs
Position
5:complement(106832726..106867818)
Genome browser
AA seq
466 aa
AA seq
DB search
MDGGTSFATLLLALQLVLLPAMTSEKELILGEAGDQAKLPCKASKKENMDFTWKQQDQLI
IMRGFRKSSPPRVIGKTKMKDRVDSSTNEWDSGNFSLIIKKLEIADSGSYFCEVENRKQE
VQLLVFKLTANPNDYIFSGKNMTLTLHSPSSLPGFKVEWNGPGDKSKRILSQDKKTLNLI
HMEPKEGGIWYCDISVNGKTLKLSIKVTVFGFTSPSQTIYGMTGKTVQFSFPLNLNEQEL
NKENPKGEFTWQVEGVASPQQPAKYSWKDNNLTPKNGIPNFKAEKSNFAITFTLSPVLPQ
HAGSGVFLLKFSSGDLKQKVKLVVMRAISQESPHKQLCCDVLGPIIPGLNLRWVLENQTE
INLNVSEKQRELQVDKPKSGTWECQLFRQNKKQLNSDSFKLTAKQEWYLPFYLGIGLGAG
ASLLLLFGLSTFCYVRRRHRLRRAERMSQIRRLLSEKKTCQCPHHF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggaacttcctttgcaaccttgctcctggctctgcagttggttctattgcct
gccatgaccagtgaaaaggagctgatactgggtgaggctggggatcaggccaaattgcct
tgcaaggcttcaaagaaagaaaatatggactttacttggaaacaacaggaccaacttatt
attatgaggggcttcagaaaaagttcaccaccaagagtgataggaaagacaaaaatgaaa
gatagagtggattcctcaacaaatgaatgggactcgggcaacttttctctgatcatcaag
aagctggagatagcagactctgggagctatttctgtgaggtagagaaccgaaagcaggaa
gtccaacttttggtgttcaaattgacggccaacccaaatgattatatattttctggaaag
aacatgactttaacattacatagcccctccagccttcctggattcaaggtggaatggaat
ggtccaggagataaaagtaaaaggatcctgagtcaagacaagaaaactttgaacttaatc
catatggagcccaaagaaggaggtatttggtactgtgatatctctgtgaatggcaaaacc
ctgaaattgagcatcaaagtcacagtatttggtttcacatcaccatcccagaccatctat
gggatgacaggcaaaactgtccaattctccttccctctgaatttaaatgagcaggagctg
aacaaggagaatccaaaaggagaattcacatggcaggtggaaggtgttgcctctccccaa
cagccagccaagtattcatggaaggataataatttgacgcccaaaaatgggattccaaat
ttcaaagcggagaagtctaatttcgcaatcacattcactctttcccctgtcttgccccag
catgctggctcaggagtcttccttctaaaattttcttcgggagacctgaaacagaaggtc
aagcttgtggtaatgagagctatatcccaggaatcaccacataagcaactgtgctgtgac
gtgctgggccccataatccctgggctgaatctgagatgggtgctagaaaaccagacagaa
ataaacctgaatgtttcagagaagcaaagggagctgcaggtggacaaaccaaagtctggg
acatgggaatgccaattgttccgccaaaataagaaacaacttaattcagattccttcaaa
ttgacagcaaagcaggagtggtatcttcccttttatctgggcattggactgggtgcagga
gcaagcctgctgcttctctttgggctctctaccttctgttatgtcagacgaagacacagg
ctgcgccgagcagagcggatgtctcagatcaggagactcctgagtgagaaaaagacctgc
cagtgtccccatcatttttag
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