Sarcophilus harrisii (Tasmanian devil): 100923245
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Entry
100923245 CDS
T02286
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00310
Lysine degradation
shr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100923245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100923245
03036 Chromosome and associated proteins [BR:
shr03036
]
100923245
Enzymes [BR:
shr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100923245
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100923245
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100923245
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100923245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-met
zf-C2H2_5
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
100923245
NCBI-ProteinID:
XP_031817457
LinkDB
All DBs
Position
3:589083878..589085455
Genome browser
AA seq
372 aa
AA seq
DB search
NVITSLRTSPGIHLCPSCPSDFSTHAFLSQQVPKQPSQGFLDSTTGSHGLGNLHPDQLLP
PGYSCVSDKAETSRKEHPSTLWEKIKKVDLEEPASLPQRQHVREEESNLGEWDLSRIQGE
SVKLTSLALQEESQEGLGQYKCGEGKQRYSSKPGLIRHRQRTHSGEKCYVCEECKRGFAR
RSYLNIHRRRHSGQKPHVCEECKRGFADKSTLIRHRWTHSKEKPYICEECKQGFTQKSYL
IKHRWKHLGEKPYVCKECKQRFTQRSYLNTHRWRHXAKESFVHEECRXGFTXRSXLIIHR
WTHSGERPYVCEECKGGFTQRSYLNTHRXGNVGKEEPYVCEECRXGFVDKPAFIPYKXTR
SGEKPVKDLPRI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
aatgttattacttctttaagaacaagtccaggaatccatctttgcccttcttgcccttca
gacttctccactcatgccttcctcagtcaacaagtgcccaaacagccctctcaaggattc
ctggattcaaccacaggaagtcatgggctgggcaatctccatccagaccagctgcttcca
cctggttacagttgtgtaagtgacaaagcagaaacatcacgaaaagaacaccctagcacc
ttatgggagaagatcaagaaagtggatctggaggaaccagccagccttcctcagaggcag
catgtgagagaggaagaaagcaaccttggggagtgggatctcagcaggatccagggggag
agtgtgaaattgacctcattggcattacaggaggaatctcaagaagggcttgggcaatac
aagtgtggtgaaggcaagcaaagatacagctcaaagccaggccttattagacacaggcag
cggacacactcaggagagaagtgttatgtgtgtgaggagtgcaagcggggatttgcacgg
aggtcatacctcaacatacacaggcggagacactcaggacagaagcctcatgtgtgtgag
gagtgcaagcggggatttgcagacaagtcaaccctcatcagacacaggtggacacactca
aaagagaagccttatatatgtgaagagtgcaagcaaggatttacacagaagtcatacctc
atcaaacacaggtggaaacacttaggagagaagccttatgtgtgtaaggagtgcaagcaa
agatttacacagagatcatacctcaacacacacaggtggagacatnaggcaaaggagtct
tttgtgcatgaggagtgcaggtgaggatttacatagagatcatagctcatcatacacaga
tggacacactcaggagagaggccttatgtgtgtgaggagtgtaagggaggatttacacag
agatcatacctcaacacacacaganntggaaatgtagggaaagaggagccttatgtgtgt
gaggagtgcaggtgaggatttgtagacaagccagccttcatcccatacaagtgaacacgc
tcaggagagaagccagtcaaagatttaccaaggatttag
DBGET
integrated database retrieval system
