Sarcophilus harrisii (Tasmanian devil): 100923444
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Entry
100923444 CDS
T02286
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04721
Synaptic vesicle cycle
shr04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100923444 (SLC6A4)
04721 Synaptic vesicle cycle
100923444 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100923444 (SLC6A4)
Transporters [BR:
shr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100923444 (SLC6A4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100923444
NCBI-ProteinID:
XP_023359468
Ensembl:
ENSSHAG00000003899
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All DBs
Position
4:complement(436834673..436891854)
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AA seq
630 aa
AA seq
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METTPLDSKKGQSACKDGEDCQKNGILQKGLTSPGDKAEAGQISNGYSAVQSSGEEGDAQ
NSNTADNTALDTEVHPGERETWTKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIFKGIGFAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCENPWNTDNCTNYFSEGNITWTSHSISPAEEFYTRHVLQIH
KSQGLDDVGGISWQLALCIMLIFTIVYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSIVNCMTSFMSGFVIFTVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPAA
TFFAIIFFLMIITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWFVLAVVITCFFGSLST
LTFGGAYVVKLLEEYATGPAVLTVVFLEAIAVSWFYGINQFCSDVKEMLGFSPGWFWRIC
WVAISPIFLLFIICSFLSSPPELRLFNYNYPRWTVLLGYCIGTSSFICIPTYITYRLIVT
PGTFKERVLKSITPETPTEIPFGDLRLNTV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccccactggattctaaaaaagggcagtcagcctgcaaggatggagaagac
tgtcagaaaaatggcattctacagaagggactcactagtccaggggacaaggcggaagca
ggacaaatctcaaatgggtactcagccgttcagagctcaggtgaggaaggggatgcccaa
aactccaacacagctgataacactgccctagacactgaagtccatcctggggagcgagag
acctggaccaaaaagatggacttcctcctctcagtcatcggctatgctgtggacctgggc
aacgtgtggcgcttcccatatatatgctaccaaaatggaggaggggccttccttatcccc
tacaccatcatggccatttttggtgggattcctctgttctatatggagctggctctgggc
caatatcatcgaaatggctgcatttcaatatggaagaaaatttgccccattttcaaaggg
attggcttcgccatttgcatcatcgccttttacatcgcctcctactataacaccatcatg
gcctgggctctctactacctcatctcttcctttacggatcaactgccttggaccagctgt
gagaacccctggaacaccgacaattgcaccaactacttttcggaaggcaacatcacctgg
acttcccactccatatcacctgctgaagaattttatacgcgccatgtcttacagatccat
aagtctcaaggactagatgacgtggggggcattagctggcaactggccctctgtataatg
ttgatcttcactattgtctactttagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgacggctactttcccttatatcatcctgtccatcctgcttgtaaggggggcc
acgcttccaggagcctggagaggtgtccttttctacctgaaacccaattggcagaagctc
cttgaaactggggtctgggtggatgcagcggctcagattttcttctcgttgggtcctggc
tttggtgtcttactagcctttgctagctacaacaaattcaacaacaactgctaccaagat
gccctggtgactagcattgtaaattgcatgacgagcttcatgtctggatttgtgatcttc
actgtgctcggttacatggcagagatgaggaatgaagacgtgtccgaggtggctaaagat
acagggcccagtctccttttcatcacctatgcagaggccattgccaacatgccagccgcc
accttcttcgccatcattttcttcttaatgataatcactctgggcttagacagcacgttc
gcaggacttgagggagtgatcaccgcggtgctggacgaattcccccatgtctgggccaaa
cgccgggagtggtttgtgcttgctgtggtcatcacctgtttctttggatctctgtccacc
ttgacttttggaggagcctatgtggtaaagttgctggaagaatacgccactggaccagcg
gttctcactgtagtgtttttagaagcgattgccgtgtcttggttctatggtattaaccag
ttctgcagcgacgtgaaagaaatgcttggttttagccccggttggttctggaggatctgc
tgggtagcaatcagcccaatatttctgctgttcatcatctgcagttttctgagcagcccc
ccagaactgcggctcttcaattacaattaccctcgctggactgttctcctgggctactgc
attgggacttcttccttcatctgcattcccacctatatcacttatcggttgatcgtcact
ccagggacattcaaagagcgtgttcttaaaagtatcactccagaaacacctacagagatt
cccttcggagaccttcgcttgaatactgtgtag
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