Sarcophilus harrisii (Tasmanian devil): 100931204
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Entry
100931204 CDS
T02286
Symbol
GRIN3B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04020
Calcium signaling pathway
shr04024
cAMP signaling pathway
shr04080
Neuroactive ligand-receptor interaction
shr04724
Glutamatergic synapse
shr05017
Spinocerebellar ataxia
shr05020
Prion disease
shr05030
Cocaine addiction
shr05031
Amphetamine addiction
shr05033
Nicotine addiction
shr05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100931204 (GRIN3B)
04024 cAMP signaling pathway
100931204 (GRIN3B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100931204 (GRIN3B)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100931204 (GRIN3B)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100931204 (GRIN3B)
05020 Prion disease
100931204 (GRIN3B)
09165 Substance dependence
05030 Cocaine addiction
100931204 (GRIN3B)
05031 Amphetamine addiction
100931204 (GRIN3B)
05033 Nicotine addiction
100931204 (GRIN3B)
05034 Alcoholism
100931204 (GRIN3B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100931204 (GRIN3B)
Ion channels [BR:
shr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100931204 (GRIN3B)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
100931204
NCBI-ProteinID:
XP_031803875
LinkDB
All DBs
Position
1:662338996..662356112
Genome browser
AA seq
1052 aa
AA seq
DB search
MEFVAALRLCLGLGLGLGLGLGPGPGPGLGHPQPCPRGAQLGAPLRLGALLPRAAALQRR
LRRALARAISEGAWGTEPELELGLGLGPEPEPELELEAPAPPSRDPASLAAWLCRLLARP
GLAALLAFPESRPELLQLHFLAASLETPVLSLLQLDARLPPATPNPFHLQLDWASPMETL
VDVLLSVLRVHAWKDIALVLCRIRDPGSFLDFWTQRTGLAPRMTLELSRLPGALTRLEAL
AGEPPPVTAAILFGCDANRALQVLAAAPPGPRWLLGTPLEATELPTQGLPPGLLAFGGDS
RPHLEDLTQDAAGLVVQALGRAAHAQPDHAILPSAVSCSSPRLAGPNSWGQRLAGFLANA
SFDGRTGHMWVTGTSQVHLQRHFQVWSLLRDPRGAPAWVTVGHWQDGRLEPAAGGVWPGA
GGLGGRTPAQSSLLEPEVGQPKLRVVTLVEHPFVFTREVDEDGLCPAGQLCLDPGTNDSA
VLGELFAALDDPGNSSVPRELRKCCYGYCIDLLERLAEDLPFAFELYIVGDGKYGAWRDG
RWTGLVGDLLAGSAHMAVTSFSINSARSQVIDFTSPFFSTSLGILVRTRDTASPIGAFMW
PLHWTMWVGVFVALHLTALFLTLYEWRSPYGMTPHGRNRLKVFSYSSALNLCYAILFGRT
VSSKTPKCPTGRFLMNLWAIFGLLVLSSYTANLAAVMVGEKTFEELSGIHDPKLHHPSQG
FRFGTVWESSAEAYIKKSFPEMAEYMRRHNVPTTPDGVTMLTTDPPKLNAFIMDKSLLDY
EMSIDADCKLLTVGKPFAIEGYGIGLPRDSPLTSNLSEFISRYKSSGFIDLLHDKWYKMV
PCGKRVIAVTETLQMGIYHFSGLFVLLCLGLGCALLTSLGEHIFYRLVLPHIRKHAKLQY
WLHTSQKIHRALNADLDQQKNQKSEPEPEPEPEPSCDTQSEESSRNSLRLVAKGERRVRF
QEPEVKGPDLQLTNGRLPQQQPEARPQAAPLAAAAAPTTQSELKALEQRIKGMRDQLRAA
LLRKSELVLLLGRDLPPRSRLLPPLQEISEDR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtggccgcgctgcgcctctgcctggggctggggctggggctggggctgggg
ctgggacccgggccggggccggggctgggccacccgcagccctgtccccggggtgcgcag
ctcggggccccgctgcgcctgggcgccctcctgccccgggcggcggccctgcagcgccgc
ttgcggcgcgccctagcccgggccatctcagagggcgcatggggaaccgagccggagctg
gagctggggctggggctggggcccgaaccggagccggagctagagctggaggcccccgcg
cccccctcccgggaccccgcctcactggccgcctggctgtgccgcctgctggcccggccc
gggctggctgcactgctggccttccccgagtcccggccggagctgctgcagcttcacttc
ctggccgccagtctggagacccccgtgctgagcctgctgcagctggacgcgcgcctgccg
cctgccacgccgaatcccttccacctgcagctggactgggccagccccatggagacacta
gtggatgtgctcctctctgtgcttcgggtccatgcctggaaggacatcgccctggtgctg
tgccgcatccgtgaccccggaagcttcttggacttctggacccagcgcacggggctggcc
ccgaggatgaccctagagctgagccggcttcctggagctctgacgcgccttgaggccctg
gcgggggagcctccccctgtcacagccgccatcctgtttggctgtgatgccaaccgtgcc
ctccaagtgttggccgcggcccctcccggaccccgctggctcctgggcacacccctggag
gccacagagctgcctactcagggcctgcccccgggactgctggcctttggtggggacagc
cggccccacctggaggatctcacccaggatgctgcagggctggtggtgcaggctctgggc
agggctgcacatgcccagcctgaccacgccatcttgccctcagcagtcagctgtagcagc
ccccgactggcagggcccaactcctggggccagcgcctggcagggttcctggccaatgct
tccttcgacggtcggacgggccacatgtgggtgaccggcacctcccaggtccacctccag
cgccacttccaggtgtggagcctcctgcgggacccccggggggccccggcctgggtgacc
gtgggccactggcaggacgggcggctggagccggcggcgggcggggtgtggccgggggcg
gggggcctcggagggcggacgccagcccagtcctctctgctggagcctgaggtcgggcag
ccgaagctgcgggtggtcaccctggtggaacacccctttgtcttcacccgggaggtggac
gaggacgggctctgtcctgctggccagctgtgcctggaccctggcaccaatgactcagcc
gtcctgggcgagctctttgccgcgctggacgatccgggtaacagctcggtgccccgggag
ctgcgcaaatgctgctacggctactgcatcgacctgctggagcggctggcagaggacctg
ccctttgccttcgagctgtacatcgtgggggatggcaagtacggcgcctggcgcgacgga
cgctggaccggcctggtgggggacctgctggcaggcagcgcccacatggccgtcaccagc
ttcagcatcaactcggcgcgcagccaggtcatcgacttcaccagccccttcttctccacc
agcctgggcatcctggtccggacccgcgacacggcctcgcccatcggggccttcatgtgg
cccttgcactggaccatgtgggtgggggtcttcgtggccctgcacctgaccgccctcttc
ctcacgctctacgagtggcgcagcccctacggcatgaccccccatgggcgcaaccgcctc
aaggtcttctcctactcctccgccctcaacctctgctacgccatcctgttcggccgcacc
gtctccagcaagacgcccaagtgccccacgggacgcttcctcatgaacctctgggccatc
ttcggcctcctcgtgctctccagctacacggccaacctggccgccgtgatggtgggggag
aagaccttcgaggagctgtcgggcatccacgaccccaagctccaccacccctcccaaggc
ttccgcttcggcaccgtgtgggagagcagcgccgaggcctacatcaagaagagcttcccc
gagatggccgagtatatgcggaggcacaacgtgcccaccacgcccgacggggtcaccatg
ctcacgacagaccctcccaagctcaatgccttcatcatggacaagtctctgctggactac
gagatgtctatcgacgcggactgcaaactgctgactgtggggaagccatttgccatcgaa
ggctacgggatcgggctacctcgggactcgcctctcacctccaacctgtccgagttcatc
agccgctacaagtcatcaggcttcattgatctgttgcatgacaagtggtacaaaatggtg
ccctgtggcaagagggtcattgccgtcacggagactctgcagatgggtatctaccacttc
tcggggctctttgtgctgctctgcctgggcctgggctgcgccctcctcacctccctgggc
gagcacatcttctaccgcctggtccttcctcacatccgcaagcacgccaagttacagtac
tggctgcacacgagccagaaaatccatcgggctctcaacgccgacttagaccagcagaag
aaccagaagtcagagccagagccggagccagagccggagccaagttgtgatacccagagt
gaggaaagcagcagaaacagccttaggctagttgcgaagggcgagcgcagggtccggttt
caggaaccggaggtcaaggggcccgacctgcagcttaccaacgggcgcctgccccagcag
cagccagaagcccgtccccaggccgctcccctggcagccgctgcagctcccaccacccag
agcgagctgaaggccctggagcagagaatcaagggcatgcgagatcagctccgggccgcc
ctgctcaggaagagcgagctggtgctcctgcttgggagggacctgcccccccgcagccgg
ctcctgccgcccctccaggagatcagcgaggacaggtaa
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