Sarcophilus harrisii (Tasmanian devil): 100934048
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Entry
100934048 CDS
T02286
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100934048 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100934048 (POLR1B)
Enzymes [BR:
shr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100934048 (POLR1B)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100934048 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
100934048
NCBI-ProteinID:
XP_031806863
Ensembl:
ENSSHAG00000017013
LinkDB
All DBs
Position
2:143784112..143803699
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPGCKWRNLPSGPSLKHLTEPSYGAPREQQLPALQELTRAHIESFNYAMREGLSHAVQA
IPPLEFAFKDERITFAIVDAVVSPPMVPKGSICKELKVYPAECRGRRSTYRGKLTADISW
SVNGIPKGIIKQSLGYIPIMVKSKLCNLNNLPPKALIEHHEEAEEMGGYFIINGIEKIIR
MLIMPRRNFPIAMIRPKWKTRGPGYTHYGISMHCVRDEHTAINMNLHYLENGSVMVNFIY
HKELFFLPLGFVLKALVGFSDYQIFQELIKGREENSFFRNCVSQMLRIVMEEGCLTQKQV
LNYLGERFRVKLTLPDWYSNEQAAEFLLNQCVCIHLKSNEEKFYVLCLMTRKLFTFAKEE
CMEENPDSLMNQEVLTPGRLILMFLKEKMEAWLASVKIALDKRAQKTNVSINTENLMKIF
SMGLDLTRPFEYLLATGNLRSKSGLGMLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAVCEIVTQTTYISSIPPLLCSLGVT
PIDGSPSQPYSECYPVMLNGVMVGWVEKDLAPAIADSLRNFKVLGKKQIPPWMEIVLIPM
TGKPSLYPGLFLFTTPCRMIRPVQNLELGKEELIGTLEQIFMNIAIFENEIVSGVTTHQE
LFPHSMLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKTELID
LSEKIKQGDDSLVFGVKPGDQRTLQKLDDDGLPHIGSLLKYGDPFYSYLNINTGESFVTY
YKNKENCIVDNIKVCSNDSGNGKFKSICITMRIPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMMPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGEMLKAAGYNFYGTERLYSGVSGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVM
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggttgtaagtggcggaacctacccagcgggcccagcctcaaacacttgacc
gaaccgagttatggggcacccagagaacagcagctgccggcgctgcaggagctcacgcga
gcgcacatcgagtccttcaactacgctatgcgagagggtctcagccacgcggtgcaggcc
attccacccttggaatttgctttcaaagatgaacggatcacttttgctattgtggatgct
gttgttagtcctcccatggtccctaaagggagtatctgcaaagagttgaaagtctaccca
gcagaatgtcgtggtcggagaagtacatatcggggaaagctgacagctgatatcagctgg
tctgtgaacgggatcccaaaaggaatcattaaacaatcacttggctatattcctattatg
gtgaagtctaagctgtgcaacttaaataatcttcctccaaaagctctcattgagcaccat
gaggaagcagaggaaatgggaggctattttataataaatggtattgaaaaaattatcagg
atgctaattatgcctcggagaaattttccaattgcaatgataagaccaaaatggaaaacc
agaggccctggctatacccattacggaatttcaatgcactgtgttagagatgaacacacg
gctattaatatgaaccttcactacctggaaaatggctcagtgatggtgaattttatttat
cataaagaattattttttcttcctctgggatttgtacttaaggcattagttggtttttct
gattatcagatttttcaagaactgatcaaaggaagagaggagaactcattttttaggaac
tgtgtttctcagatgttaagaattgtaatggaagagggttgtctcacacaaaaacaagtg
cttaactatctgggagaacgtttcagagtaaagcttacccttcctgattggtactcaaat
gaacaagctgcagaatttctgttaaatcagtgtgtgtgtatccatctgaaatccaatgaa
gaaaagttttatgtactttgtcttatgactcgaaagctgtttacttttgccaaagaagaa
tgtatggaagagaatcctgatagtttaatgaatcaggaagttctcacaccagggcgactc
atccttatgtttttaaaggaaaagatggaagcttggttggcatctgttaaaatagcttta
gataagagagctcaaaagaccaatgtctctattaatactgaaaatctcatgaagatattt
agtatgggattagaccttacaagaccatttgagtatcttcttgctactggcaatctacgt
tcaaaatcaggtcttggcatgctgcaagattctggtctctgtgtagtggctgacaaactg
aatttcatacgctacctttcccattttcgctgtgtacaccgaggtgctgcctttgccaaa
atgagaacaaccacagtacgcaagctccttccagaatcctggggtttcctttgtcctgta
cacacaccagatggggaaccctgtgggctgatgaaccacatgactgctgtctgtgagata
gtcacacagactacctatatatcttctatcccacctttgctttgttccttaggcgttacc
ccaattgatgggagtccaagtcaaccctatagtgaatgctaccctgttatgttgaatggt
gtcatggttggctgggtagaaaaagatcttgctcctgccattgcagattctctccggaat
tttaaggtattggggaaaaaacaaatccctccttggatggaaatagttcttatcccaatg
actggaaagccaagtttatatcctggactatttcttttcactactccttgcagaatgata
cgacctgtgcagaatttggaattaggtaaagaagaactgattggaactctggaacagatc
tttatgaatattgctatctttgaaaatgagattgtttctggagtaaccacacaccaggag
ctctttcctcatagcatgctgagtgtggtagccaatttcattcctttctctgatcataat
cagagtcctcgaaacatgtatcaatgtcaaatgggtaaacaaactatgggatttcccctt
cttacctaccaagatcgatcagataataaactatatcgtcttcagactccacaaagccca
ttagttagaccatacatgtatgattactatgatatggataactatcccattgggacaaat
gctattgttgctgtcatttcatacacaggatacgatatggaagatgctatgattgtgaat
aaagcttcttgggaaagaggctttgctcatggaagtgtctacaagacagaactcatagat
ctttctgaaaaaatcaaacaaggagatgatagtctggtgtttggagtcaaacctggtgat
cagcgaactctacagaaattagatgatgatggtttgccacatattggatctcttctgaaa
tatggggaccctttttacagttacctaaatatcaacacaggggaaagctttgtgacatac
tataaaaataaggaaaattgcattgtggataacattaaagtatgtagtaatgactctggg
aatggaaaattcaaaagcatctgcatcacaatgagaatcccccggaacccaactattggt
gacaaattcgctagtcgccacggacagaagggcattttgagcagactgtggcctgccgag
gatatgccttttaccgaaagcgggatgatgcccgacattctgttcaatcctcatggtttt
ccatctcgaatgaccatcggcatgttgattgagagcatggcagggaaatctgccgctcta
catggcctctgccatgatgctacccccttcactttttcagaggagaattctgccctggag
tactttggtgagatgttgaaggctgccggttacaacttctatggcacggagagattgtac
agcggcgtcagtggggtagaactagaagcagatattttcataggggtggtctactatcag
cgcttacgtcacatggtctcagacaagtttcaggtgaggacaaccggagcccgagataaa
gtcaccaaccagcccatcgggggcaggaatgtccagggtggaatccgttttggagaaatg
gagcgagatgcccttctggcacatggcacctcctttctgcttcacgaccgcctcttcaac
tgctctgaccgctctgtcgctcacgtgtgtgtgaagtgtggtagcttgctttcgcccctt
ttagagaagccgccaccttcctggtccgccatgcgcaacaggaaatacaactgcactgtg
tgtaatcgtagtgacaccattgatacagtttctgttccttatgttttccgctactttgta
gccgaattggcagctatgaacatcaaagtcaaacttgatgtcatgtaa
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integrated database retrieval system
