Sarcophilus harrisii (Tasmanian devil): 116421495
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Entry
116421495 CDS
T02286
Symbol
ODC1
Name
(RefSeq) ornithine decarboxylase isoform X1
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00330
Arginine and proline metabolism
shr00480
Glutathione metabolism
shr01100
Metabolic pathways
shr04148
Efferocytosis
Module
shr_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
116421495 (ODC1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
116421495 (ODC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116421495 (ODC1)
Enzymes [BR:
shr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
116421495 (ODC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF5448
Motif
Other DBs
NCBI-GeneID:
116421495
NCBI-ProteinID:
XP_031807157
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All DBs
Position
2:208704199..208712060
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AA seq
490 aa
AA seq
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MNNFSNDEFNFSFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDVLKKHLRWYKAFP
RVTPFYAVKCNDSRAIVKTLATIGAGFDCASKTEIQLVQSLGVSPERIIYANPCKQVSQI
KYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLL
LERAKELNIDIIGVSFHVGSGCTDPETFVQAVSDARCVFDMGVEFGFNMYLLDIGGGFPG
SEDVKLKFEEISSVVNPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQ
TGSDDEDEANDQTFMYYVNDGVYGSFNCILFDHAHVKPILQKVIHLRNRTSKGLGEGAAY
SLCSCFGFFPQRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTV
AAASTFNGFQRPTIYYVMSGPAWQCMQQMKNQGFPAEVEDQDINTLPLSCAWESGMEHHS
TTCTSASINV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactttagcaatgatgaatttaacttcagtttccttgatgaaggctttactgca
aaggatattctggaccagaaaattaatgaagtttcttcttctgatgataaagatgccttc
tatgttgctgaccttggtgacgtcctaaaaaaacatttgagatggtacaaagcttttcct
cgagtaactcctttttatgctgttaaatgtaatgacagcagggctatagtgaagacactt
gctactataggagcaggatttgattgtgctagcaagactgaaatacaattagtacagagt
cttggggtgtctccagagaggataatttatgcaaatccatgcaaacaagtgtcacaaatt
aagtatgctgccaacaatggagtacaaatgatgacttttgatagtgaagtagagctaatg
aaagttgccagagctcatccaaaggcaaagcttgttttgaggattgccactgatgactcc
aaagctgtctgtcggttaagtgttaaatttggtgccactctcaaaactagtaggctactt
cttgagcgagcaaaggaactgaatattgatattattggagttagtttccacgtgggaagt
ggttgcactgatccagaaacctttgtccaagcagtttctgatgcccgatgtgtctttgat
atgggggtggaatttggtttcaacatgtatcttcttgatattggtggtggctttcctggt
tctgaagatgtaaagcttaagtttgaagagatctcaagtgtagtcaatccagcattggat
aagtattttccttctgattctggagtgagaattatagctgaaccaggcagatactatgtt
gcatcagctttcacgcttgcagttaatatcattgccaaaaaactcgtattaaaggaacag
acaggttctgatgatgaagatgaggcaaatgaccaaacctttatgtactatgtaaatgat
ggagtatatggatcatttaattgcatcctgtttgatcatgcacatgttaaacctattcta
caaaaggtaattcatttaagaaataggacaagtaaagggctgggtgagggggcggcatat
agcttatgttcatgttttggttttttcccccagagacccaaaccagatgagaagtattat
tcttctagcatatggggaccaacatgtgatggccttgatcgtattgttgaacgctgtgat
ttaccagaaatgcatgtaggagattggatgctgtttgaaaacatgggtgcttacactgtt
gctgctgcttccacttttaatggattccagagacccactatctattatgtgatgtctggg
ccagcatggcaatgtatgcaacaaatgaagaatcaaggttttcccgcagaagtagaggat
caggatatcaacactttgccattatcttgcgcttgggaaagtggaatggaacatcactcg
acaacttgtacttcagctagtattaatgtatag
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