Stereum hirsutum: STEHIDRAFT_69654
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Entry
STEHIDRAFT_69654 CDS
T03127
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
shs
Stereum hirsutum
Pathway
shs00100
Steroid biosynthesis
shs00909
Sesquiterpenoid and triterpenoid biosynthesis
shs01100
Metabolic pathways
shs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
STEHIDRAFT_69654
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
STEHIDRAFT_69654
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shs01006
]
STEHIDRAFT_69654
Enzymes [BR:
shs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
STEHIDRAFT_69654
Prenyltransferases [BR:
shs01006
]
Terpene biosynthesis
Squalene/phytoene synthase
STEHIDRAFT_69654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF3789
Motif
Other DBs
NCBI-GeneID:
18806560
NCBI-ProteinID:
XP_007311563
JGI:
Stehi1_69654
UniProt:
R7RWU2
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSVLSMLTLLLTHPNEFRTLVQFWMFHDSKRDISNPKEYATSGWDRESMKKCWELLDKTS
RSFSAVIKELDGDLARAICLFYIVLRGLDTIEDDMTIADSIKQPLLRSFHEKTLTPGWTF
DGNGPEEKDRIVLVEYDKVVEEVGRLEPGYREVIVDICHKMEIGMADYAHRASSSASSSS
TPSPIYLSTIAEYDLYCHYVAGLVGEGLSRIWAASGKEAPYLGEMKELSNSMGLLLQKTN
IIRDFREDADQGRFFWPREIWGRSEYIIASGVPLTPSLEKGGRVEDLYQDRTEAGRRRAL
YVQSGMVLDALRHATDSLDYLRLLRNQTVFNFCAIPAVMAMATLELCFANGEVFERHVKI
RKAVAAKLIMNSTNPRDVAYMFRDYARAIHKKSNPADPNFIRISVACAKIEQWAEHQFPS
FVHLSSDPSGSGSSSATQTLDPSDARTRIAKLAQERDLQLAKLRASVNGNGVGANGKAGG
AGANANAGVDKELVLFFGGAVLLIVVMCLLVVGTVLYFAS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctttcaatgctcaccctcctcctcacccaccccaacgaattccgcacgctc
gtccagttctggatgttccacgactccaagcgcgatatctccaacccgaaggagtacgcc
acgtccggctgggacagggagagcatgaagaagtgctgggagttgttggataagacgagt
aggagtttttcggcggtgattaaggagctggatggggaccttgcgagggcgatctgcctc
ttctacatcgtcctccgcggcctcgacaccatcgaagacgacatgaccatcgccgactcc
atcaaacaacccctcctccgctccttccacgaaaagacgctcacgcccggctggaccttc
gatggcaacggccccgaggagaaggatcggatcgttctggtcgagtacgataaagtagtc
gaggaggtcgggaggctcgaacctggatatcgggaagtgatagtcgacatctgtcacaaa
atggaaatcggaatggcagactacgcccaccgcgcctcctcctctgcctcctcctcctcc
accccctccccaatatacctctccaccatcgcagaatacgacctctactgccactacgtc
gccggcctcgtcggcgagggcctctcccgcatctgggccgcctcgggcaaagaagccccc
tacctcggcgaaatgaaagaactgagcaattcgatgggacttctgttgcagaaaacgaac
atcatccgtgatttccgagaagacgcagaccaaggccgattcttctggcctcgcgagatc
tggggccgttccgaatacatcatcgcttccggggtcccactcaccccttcactcgaaaaa
ggcgggcgcgtggaggatttgtatcaggataggacagaggcggggagacggagggcgctg
tatgtgcagagtgggatggtgttggatgcactgagacatgcgacggatagtttggattat
ttgaggttgttgaggaatcagacggtttttaatttttgtgcgattccggcggtgatggcg
atggcgacgcttgagttgtgttttgcgaatggggaggtgtttgagaggcatgtgaagatt
aggaaggcggttgctgcgaagttgatcatgaactcgacgaacccgcgcgacgtggcgtat
atgttccgcgactatgcgcgcgcgatacataaaaagtcgaatccggccgatccgaacttt
atcaggatatcggtcgcttgtgcgaagatcgaacaatgggccgaacaccaattcccctcc
ttcgtccacctctcctccgacccctccggctccggctcctcctcagccacccaaaccctc
gatccctccgacgcgcgcacacggatcgcgaagctggcccaggagcgggatctacagctc
gctaaactgcgtgcttccgtgaatgggaatggtgtaggggcgaatgggaaggcaggtggg
gcgggggcgaatgcgaatgcgggggtcgataaggagctggtgttgttctttgggggcgcg
gtgttgttgatcgtggtgatgtgtttgttggtggtggggacggtgctttattttgcgtcg
tga
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