KEGG   Staphylococcus hyicus: SHYC_05780
Entry
SHYC_05780        CDS       T03578                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
shu  Staphylococcus hyicus
Pathway
shu00740  Riboflavin metabolism
shu01100  Metabolic pathways
shu01110  Biosynthesis of secondary metabolites
shu01240  Biosynthesis of cofactors
shu02024  Quorum sensing
Module
shu_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:shu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SHYC_05780 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SHYC_05780 (ribD)
Enzymes [BR:shu01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SHYC_05780 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SHYC_05780 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam APOBEC_N
Other DBs
NCBI-ProteinID: AJC95898
LinkDB
Position
1168996..1170042
AA seq 348 aa
MNHFLEKAITLAQMVEGQTGLNPPVGAVIVKNGRIIGMGAHLKQGERHAEIQAIDMAGAD
QVKGATIYVSLEPCSHFGKTPPCAKRIIETGITHVVYAARDVTLPATGHHMMEQEGVKVD
YRPHPKAAQLYASFFKSKQEGHPIVTVKVSASLDGKQATDHFESQWITNPSVKKDVFRLR
HKHDAIITGSGTLKCDNPSLTVRSEQGRQPVRVILARKGDIDWCSNMFHDNDSPVLIYTE
NKTLKSSLSNIKVINLECCDVDNILRDLYLKGFGRVLVEAGPNVTSQFLSSKMVTHFILY
LAPKLIGGRGVNQFYQTETVCKLSDTHQFEIVETSLIDTNVKIHMKRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
gtgaatcattttttagaaaaagcaattacgttagcacaaatggtagaaggtcaaactggt
ttaaacccacctgtaggcgcagtcattgtgaaaaacggccgtatcattggtatgggtgcg
catttaaaacaaggtgaacgtcatgcagaaatccaagcaattgatatggcaggcgcagac
caggtgaaaggtgcaacgatatatgtatcgttagaaccatgttctcattttggcaaaacg
ccaccctgtgcaaagcgtataatcgaaacgggaattacgcatgttgtctatgcagcgcgc
gatgttacgttgcctgcgacgggtcatcatatgatggaacaggagggggttaaagtagat
tatcgacctcacccgaaagctgcacaattatatgcatcattttttaaaagcaagcaagag
ggacatccgatagttactgtgaaagtaagcgcgagtttggatggcaaacaagccacagat
cattttgaaagtcagtggattacgaatccctctgtaaagaaggatgtatttcgtttacgt
cataaacatgatgcaattatcacaggttctggcactttaaagtgcgataatccgagcttg
actgtgcgctctgaacaaggaaggcaaccggttagagtcattttggcacgtaaaggtgac
attgattggtgttctaacatgtttcatgataatgatagtccggttttaatttataccgaa
aataaaactttaaaatcctcactttctaacataaaagtgataaatttagaatgttgtgat
gtagacaatattttaagggatttatatttaaaagggtttggacgtgttcttgtcgaagca
ggtccaaatgtaacctctcaatttttatcatctaaaatggtaacgcatttcattttatat
ttagccccgaaattaataggtggacgaggcgtaaatcagttctatcaaaccgaaactgta
tgtaagcttagtgacacccaccaatttgaaattgttgagacatcattaatagatacaaat
gtgaaaatccacatgaaaaggaagtga

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