Stella humosa: STHU_47700
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Entry
STHU_47700 CDS
T06078
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
shum
Stella humosa
Pathway
shum00540
Lipopolysaccharide biosynthesis
shum01100
Metabolic pathways
shum01250
Biosynthesis of nucleotide sugars
Module
shum_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
STHU_47700 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shum01005
]
STHU_47700 (hldD)
Enzymes [BR:
shum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
STHU_47700 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
shum01005
]
Core region
STHU_47700 (hldD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
BBK34136
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All DBs
Position
5036323..5037309
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AA seq
328 aa
AA seq
DB search
MIIVTGGAGFIGSNLTAALEAAGRSDLVVVDRLGTDDKWRNLAKRELAAIVPPEDLPAWL
ARHGDTVSMVFHLGAISSTTERDADLIIASNFTLSLFLWDWCTAHGVRFVYASSAATYGG
AADGFDDDGSPAALAALRPLNPYGWSKHLFDRRVARLVAEGRPTPPQWAGLKFFNVYGPN
EAHKGGMSSVVAQMLPRVVAGEPARLFRSHRPDYADGGQRRDFVHVDDCVAVMLWLHERP
DVSGLFNLGTGQARSFLDLATAVFRAAGQPPRIEYVDTPVEIRDRYQYFTQARMDRLRAA
GYPGQFVPLEEGVRRYVQDFLLAPDPYR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtgaccggcggtgccggcttcatcggctcgaacctgacggcggccctcgag
gcggccggccggtccgacctcgtcgtcgtcgaccggctcggcaccgacgacaaatggcgc
aacctcgccaagcgcgagctggccgccatcgtgccgcccgaggacctgccggcgtggctc
gcccgccatggcgacacggtctccatggtgttccacctgggcgccatttcgtccacgacc
gagcgcgacgccgacctgatcatcgccagcaacttcacgctgtcgctcttcctgtgggac
tggtgcaccgcccacggcgtgcgctttgtctatgcctcgtcggcggccacctatggcggg
gcggcagacgggttcgacgatgacggcagcccggcggccctggcggcgctccgcccgttg
aacccctatggctggagcaagcacctgttcgaccgccgggtggcccgcctggtcgccgag
gggcggccgacgccgccgcaatgggcgggcctgaagttcttcaacgtctatggcccgaac
gaggcgcacaagggcggcatgtcgagcgtggtcgcccagatgctgccgcgcgtggtggcg
ggggagccggcccgcctcttccgctcgcaccggccggactatgccgatggcggccagcgg
cgcgacttcgttcatgtcgacgattgcgtggcggtgatgctgtggctgcacgagcggccg
gacgtctcgggcctcttcaacctcggcaccgggcaggcgcgcagcttcctcgacctggcg
acggccgtcttccgggcggccggccagccaccacgaatcgaatatgtcgacacgccggtc
gagatccgcgaccgctaccagtacttcacccaggcgcggatggaccggctgcgcgccgcc
ggctatccgggccagttcgttccgctggaggaaggggtccggcgctacgtgcaggacttc
ctgctggcgcccgacccgtaccgctag
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