Streptomyces hundungensis: DWB77_02160
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Entry
DWB77_02160 CDS
T07388
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
shun
Streptomyces hundungensis
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shun03009
]
DWB77_02160 (rimO)
Enzymes [BR:
shun01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DWB77_02160 (rimO)
Ribosome biogenesis [BR:
shun03009
]
Prokaryotic type
ribosomal protein modification factors
DWB77_02160 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AYG80040
UniProt:
A0A387HGK1
LinkDB
All DBs
Position
complement(2402780..2404249)
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AA seq
489 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGKTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQGAPEVALPGHAQDTPPEDLPEGVAPASGPRAPLRR
RLDTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVSE
NNTSYGKDLGDIRLLETLLPELAEVEGIERVRVSYLQPAEMRPGLIDVLTSTDKVVPYFD
LSFQHSAPGVLRAMRRFGDTERFLELLDTIRAKAPTAGVRSNFIVGFPGETEEDFKELER
FLTAARLDAIGVFGYSDEEGTEAVGYEGKLDEDTIAERLAHLSRLAEELTAQRAEERIGD
TVRVLVESVDDEDGAVGRAEHQAPETDGQVVFTESAGLAPGLMVEAKVVATEGVDLVVEL
VGGVEEAGR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgcaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcagcggacggctgggagctcgtcgaggacgcatcg
gacgcggacgtcgccgtcgtcaacacctgtggattcgtcgaagccgccaagaaggactcc
gtcgacgccctcctcgaagccaacgatctgaaggatcacggcaagacccaggccgtcgtc
gcggtcggctgcatggccgagcgctacggcaaggatctcgccgaggcgctcccggaggcc
gacggcgtcctcggcttcgacgactacgccgacatctccgaccgcctccagaccatcctc
aacggcggcatccacgcctcgcacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggccgagcgccagggcgcccccgaggtggcgctgcccggacacgcccaggacaccccg
cccgaggacctccccgaaggcgtcgcaccggcctccgggccgcgtgccccgctgcggcgc
aggctcgacaccagtccggtcgcctccgtgaagctggcctccggctgcgaccgtcgctgc
tcgttctgcgccatcccctccttccgcggctccttcatctcgcgccgccccagcgatgtg
ctcggcgagacccgctggctggccgagcagggcgtcaaggaggtcatgctggtctccgag
aacaacacctcctacggcaaggacctcggcgacatccggctcctggagacgctgctgccc
gagctcgccgaggtcgagggcatcgagcgggtccgggtcagctacctccagcccgccgag
atgcggccgggcctcatcgacgtactgacgtcgaccgacaaggtcgtgccctacttcgac
ctgtccttccagcactcggcgcccggcgtgctgcgcgcgatgcggcgcttcggtgacacc
gagcggttcctcgaactgctcgacacgatccgcgccaaggcccccacggccggtgtgcgg
tccaacttcatcgtcggcttcccgggcgagaccgaggaggacttcaaggagctggaacgc
ttcctcaccgcggcccgcctcgacgccatcggcgtcttcggctactccgacgaggagggc
accgaagcggtcggctacgagggcaagctcgacgaggacaccatcgccgaacggctcgcc
cacctctcgcgcctcgccgaggagctcaccgcgcagcgcgccgaggagcgcatcggcgac
accgtgcgcgtcctggtcgagagcgtcgacgacgaggacggggcggtcggccgcgccgag
caccaggcccccgagaccgacggccaggtcgtcttcaccgaaagcgccggactcgcgccc
ggccttatggtcgaggccaaggtcgtcgccaccgaaggcgtcgacctcgtggtcgagctc
gttggcggggttgaggaggcgggcagatga
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