Sphingobium xenophagum: CJD35_02590
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Entry
CJD35_02590 CDS
T05146
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CJD35_02590
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shyd01007
]
CJD35_02590
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyd03016
]
CJD35_02590
Enzymes [BR:
shyd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CJD35_02590
Amino acid related enzymes [BR:
shyd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
CJD35_02590
Transfer RNA biogenesis [BR:
shyd03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CJD35_02590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
ASY43467
UniProt:
A0A249MQQ2
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Position
I:complement(524119..525699)
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AA seq
526 aa
AA seq
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MTATDLFRTAALAAKAWPYEEARKLLKRYPDGAPDKGHILFETGYGPSGLPHIGTFNEVL
RTTMVRNAYHALSDIPTRLVAFSDDMDGLRKVPDNVPNQAMLTQHLGKPLTQVPDPFEKF
ESFAHHNNAMLREFLDRFGFDYEFVSATERYRAGAFDDALKQVLRRYQLIMDIMLPTLRK
ERQATYSPVLPISPKSGIVLQVPVEVVDAEAGIVRFEDEGEMVEQSILSGGAKLQWKVDW
AMRWYALGVDYEMAGKDLIDSVTQSSKICRALGARPPEGFNYEMFLDEKGEKISKSKGNG
LSLEQWLTYGPQESLAFYAYREPKKAKQLHMGVIPRAVDEYWQFRGNYPGQPVEQQLGNP
VHHVHDGKLPEGRLPVTFGLLLNLVGVMGDASRDQVWGYLTNYVADASPETYPDLDALIG
HALAYHRDFVAPTLQRRAPDANEAAALRRLDAELAALPADASAEDIQNIVYAIGKDEAFG
FAELRDWFKALYQTLLGADQGPRMGSFIALYGIDNSRKLIGQALAA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaccgatctattccgcaccgccgccctggcggccaaggcctggccctatgaa
gaagcgcgcaagctgctcaagcgctatcccgatggcgcgccggacaaaggccatatcctg
tttgaaaccggctatggaccatcgggcctgccgcatatcggcacgttcaacgaagtgctg
cgcacgacgatggtccgcaacgcctatcacgccctgtcggatattcccacgcgcctggtg
gcgttcagcgacgatatggacgggctgcgcaaggtgcctgacaatgtgcccaatcaggcg
atgctgacgcagcatctgggcaagccgctgacgcaggtgcccgatccgttcgaaaagttc
gaaagcttcgcccatcacaataatgcgatgctgcgcgaatttctcgaccgcttcggcttc
gactatgaattcgtctccgcgaccgaacgctatcgggccggggcgtttgacgacgcgctc
aagcaagtgctgcggcggtatcagttgatcatggacatcatgctgcccaccctgcgcaag
gaacggcaggcgacctattcgccagtcctgcccatttcgcccaagagcggtatcgtcctt
caggtgccggtggaagtcgtcgacgccgaagccgggatcgtccgtttcgaggatgaaggc
gaaatggtcgaacagtcgatcctgtcgggtggcgcaaagctgcaatggaaggtcgactgg
gcgatgcgctggtatgcgctgggcgtcgactatgaaatggcgggcaaggatctgatcgat
tcggtcacgcaatcgtcgaagatttgccgcgcgcttggtgcccggccgcccgagggcttc
aactatgagatgttcctcgacgaaaagggcgagaaaatctccaagtccaagggcaatggc
ctgagccttgagcaatggctgacatacggtccgcaagagagcctggccttctacgcctat
cgcgaacccaaaaaggccaagcagttgcacatgggcgtcatcccgcgcgcggttgacgaa
tattggcagttccggggcaattatcctggtcagccggtcgaacagcaattgggtaatccg
gtccatcatgttcatgacggcaagctgcccgaaggccggttgccggtgacctttggcctg
ttgctcaatctggtcggcgtcatgggcgatgccagccgcgatcaggtgtggggctatctc
accaattatgtcgcggatgcctcgccggaaacctatcctgatcttgacgcgctgattggc
catgctctggcctatcatcgcgatttcgtggctcccaccctccagcgccgcgcgcccgac
gccaatgaggctgcggccttgcgcaggctggacgcggaactcgctgctctgcctgccgac
gcttcagcggaggacatccagaatatcgtctatgccatcggcaaggatgaggcgttcggt
tttgccgaattgcgggactggttcaaggcgctgtaccagacgctgctgggcgcggaccaa
gggccgcgcatgggcagtttcatcgcgctttatggtatcgataacagtcggaagctgatt
ggtcaggcgctggcagcctga
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