Sphingobium xenophagum: CJD35_06810
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Entry
CJD35_06810 CDS
T05146
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_06810
01504 Antimicrobial resistance genes [BR:
shyd01504
]
CJD35_06810
Transporters [BR:
shyd02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CJD35_06810
Antimicrobial resistance genes [BR:
shyd01504
]
Gene variants
Tetracycline resistance genes
Transporters
CJD35_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
TRI12
Motif
Other DBs
NCBI-ProteinID:
ASY44185
UniProt:
A0A249MSM6
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All DBs
Position
I:1399551..1400783
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AA seq
410 aa
AA seq
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MPAPFLPRRNAAIAFILVTALLDVMSMGIVIPVLPQLIESLSGSSSAAGLWNGLFVALWA
GMQFICSPIIGSLSDRFGRRPVILLSVCGLALDYVLMAVAPNLWWLALGRILAGVTSSSF
TSVFAYMADITRPEDRARGYGLIGAAFSGGFVAGPLLGGILGEISLRAPFWAAAGLSGLA
FLYGLVVLPESLPQEKRMAFSWARANPFGALTLLRSHPELSSLAIVNFLLYFAHHLFSAV
FVLYAGDRYGWGAWQVGSLLALVGLLDMGVQGFLVGPVVKRLGDRTTMVTGLAFGAVGIA
CMGLAPTGWLFVAAMLPNALWGLAMPTIQSLMTQRVSESEQGQLQGANNSVGSIAGIVSP
LFFGGIYALSVGGNPTLPFIGSAFLIAAAVLGSAALLGWAAGRGLDADAV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcctttccttccccgccgcaatgcggccatcgccttcatcctggtgacggcg
ctgctcgatgtcatgtcgatgggaatcgtcatcccggtgctgccgcaactgatcgaatcc
ctgtccggctccagcagcgcggccggcctgtggaatggcctgtttgtagcgctatgggcg
gggatgcagttcatctgctcgccgattatcgggtccttgtccgaccgtttcgggcggcgg
cccgtgattctgctatcagtgtgcggtctggcgctcgattatgtgctgatggccgtcgcg
cccaatctatggtggctggctctggggcggatattggcgggggtcacctcgtccagcttc
acctccgtgtttgcctatatggccgacatcacccgacctgaagatcgcgcgcgcggctat
gggctgatcggggcggcattcagcggcggctttgttgccgggccactgctgggcggcata
ttgggcgagatttcgctgcgcgcgcccttttgggcggcggctggcctgtcgggactggca
ttcctttatggtctggtcgtcctgcccgaatcgctcccgcaggaaaagcggatggccttt
tcatgggcccgcgccaacccattcggcgcgctcacccttttgcggtctcacccggaactg
tcgagcctggcgatcgtcaatttcctgctctatttcgcccaccatctcttctccgccgtg
ttcgtcctctatgccggggatcgttatggctggggcgcgtggcaggtcggcagcctgctc
gccttggtcggtttgctcgacatgggcgtgcagggctttctggtcggtcccgtggtcaag
cggctgggtgaccggacgacgatggtgacgggcctggccttcggtgcggtcggcatcgcc
tgcatggggctcgcgccgaccggctggctgtttgtcgccgcgatgctgcccaatgcgctg
tgggggctggcaatgccgacgatccagtcgctgatgacgcagcgcgtatccgaatccgaa
cagggccagttgcagggcgcgaacaacagtgtgggcagtattgcaggtatcgtatcgccc
ctcttcttcggcggcatttacgcgctgtcggttggcggcaatccgaccctgcccttcatc
ggcagcgccttcctgattgcggcggcggtgctgggcagtgcggcgttgctgggctgggcg
gcgggccgtgggctggatgccgatgccgtatag
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