Sphingobium xenophagum: CJD35_16820
Help
Entry
CJD35_16820 CDS
T05146
Symbol
ligA
Name
(GenBank) protocatechuate 4,5-dioxygenase subunit alpha
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00362
Benzoate degradation
shyd00624
Polycyclic aromatic hydrocarbon degradation
shyd00627
Aminobenzoate degradation
shyd01100
Metabolic pathways
shyd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CJD35_16820 (ligA)
00627 Aminobenzoate degradation
CJD35_16820 (ligA)
00624 Polycyclic aromatic hydrocarbon degradation
CJD35_16820 (ligA)
Enzymes [BR:
shyd01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
CJD35_16820 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
ASY46157
UniProt:
A0A249MYB1
LinkDB
All DBs
Position
II:424728..425183
Genome browser
AA seq
151 aa
AA seq
DB search
MITEDPKHQDIHEYLAEFEDIPGTRVYTAARARKGYHMNQFAMSLMKDENRARFKADERA
YLDEWPLNEEQKEALLARDYNRCLDLGGNVYFLAKLFSTDGIPFAEAVSTMTDMSFPEYR
EMMMNGGRSPEGVRSIRANAASSGETNEGAR
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgaagatcccaagcatcaggatattcacgaatatcttgccgagttcgaggat
attccgggcacgcgcgtctatacggcggcgcgcgcccgcaagggatatcatatgaaccag
tttgcgatgagcctgatgaaggatgagaatcgcgcaaggttcaaggccgacgagcgtgcc
tatctggacgaatggccgctgaacgaggaacagaaggaagccctgctggcgcgtgactat
aatcgctgcctggacctgggtggcaatgtctatttcctggccaagctgttttcgaccgac
ggaattccgttcgccgaagcggtcagcaccatgaccgacatgagctttcccgaatatcgc
gaaatgatgatgaacggtggccggtcgccagagggcgtgcggtcgatcagggccaacgcc
gcgtcgagcggcgaaaccaacgaaggagccagataa
DBGET
integrated database retrieval system
