Shinella sp. HZN7: shn_05080
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Entry
shn_05080 CDS
T04278
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00190
Oxidative phosphorylation
shz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
shn_05080
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
shn_05080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shz03019
]
shn_05080
Enzymes [BR:
shz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
shn_05080
Messenger RNA biogenesis [BR:
shz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
shn_05080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
ANH03465
UniProt:
A0A1A9FX45
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All DBs
Position
1060350..1062566
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AA seq
738 aa
AA seq
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MDTATSEHAQEKPVEQVPPPEGASVDVAALMASPERFINREFSWLQFNRRVLEETLNTAH
PLLERVRFLSISAGNLDEFFMVRVAGLEGQVRQGVGIRSPDGKTSAEQLDGILKEIDNLQ
MEQQASLAVLQQYLAKEDILIVRPTALTSDDKVWLQQEFIQSIFPVLTPLSIDPAHPFPF
IPNLGFSIGLQLESTTGKEPMTALLRLPVALDRFIRLPDAKGAIRYITLEDAVGLFIGKL
FPGYIVRGSGTFRIIRDSDIEVEEEAEDLVRFFETALKRRRRGSVIRIETDSEMPESLRR
FVVGELGVPDNRVAVLPGLLALNTLSEIAKAPRDDLRFEPYNARFPERVREHAGDCFAAI
REKDMVVHHPYESFDVVVQFLLQAARDPDVLAIKQTLYRTSNDSPIVRALIDAAEAGKSV
TALVELKARFDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREEGKLRTYCHLG
TGNYHPVTAKIYTDLSFFTCNPTIASDMANIFNFITGYGEPEAGMKLAFSPYTLRPRILR
HIEEEIAHAKNGAPAAIWMKMNSLVDPDIIDALYRASQAGVEVDLVVRGICCLRPQVPGL
SDNIHVKSIVGRFLEHSRIFCFGNGHGLPSDKALVYISSADMMPRNLDRRVETLVPLINR
TVHEQVLSQIMLGNLIDNQQSYEILADGTSRRMEVQPGTEPFNAQHYFMTNPSLSGRGEA
LKSSAPKAIAGWQGRRKK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcgacttcggaacatgcgcaggaaaagcccgtcgagcaggtgccgccgccg
gaaggggcgagcgtcgatgtcgcggccctgatggcaagccccgaacgcttcatcaaccgc
gaattctcctggctgcagtttaatcgccgcgtgctcgaggagacgctgaacaccgcccat
ccgctcctggagcgcgtgcgtttcctgtcgatctcggccggcaacctcgacgaattcttc
atggtgcgcgtcgccggcctcgagggccaggtgcgccagggcgtcggcatccgcagcccc
gacggcaagacctcggccgagcagctcgacggcatcctcaaggagatcgacaatctccag
atggagcagcaggcctcgctcgccgtgctccagcagtatctcgccaaggaggatatcctg
atcgtccgcccgacggcgctcaccagcgacgacaaggtctggctgcagcaggaattcatc
cagtcgatcttcccggtcctgacgccgctctccatcgatccggcgcatccgttcccgttc
atccccaatctcggcttctcgatcggcctgcagctcgaaagcacgaccggcaaggagccg
atgacggcgctgctgcgcctgccggtggcgctcgaccgcttcatccgcctgcccgacgcc
aagggcgcgatccgctacatcacgctggaggatgccgtcggcctcttcatcggaaagctc
ttccccggctatatcgtgcgcggctcgggcaccttccgcatcatccgcgacagcgatatc
gaggtggaggaagaggccgaagacctcgtgcgcttcttcgagacggcgctgaagcgccgc
cgccgcggttcggtgatccgcatcgagaccgattcggaaatgcccgaatcgctgcgccgc
ttcgtcgtcggcgaactcggcgtgccggacaaccgcgtcgccgtcctgcccggccttctc
gccctcaacacgctgtcggaaatcgccaaggcgccgcgcgacgatcttcggttcgagccc
tacaatgcccgatttcccgaacgcgtccgcgaacacgccggagactgtttcgccgccatc
cgcgaaaaggacatggtcgtccaccacccctacgaaagcttcgacgtggtggtccagttc
cttctccaggctgcgcgcgatcctgacgttctggcgataaagcagacgctctaccgcacc
tccaacgacagcccgatcgtgcgcgcgctgatcgacgcggccgaggccggcaagtcggtg
acggcgctggtggaactcaaggcccgcttcgacgaggaggcgaacatccgctgggcgcgc
gacctcgaacgcgccggcgtgcaggtcgtctttggcttcatcgaactgaagacccatgcc
aagatgtcgatggtggtgcgccgcgaggagggcaagctgcggacctattgccacctcggc
accggcaactaccacccggtcacggcgaagatctacacggacctttccttcttcacctgc
aacccgacgatcgccagcgacatggcgaacatcttcaacttcatcaccggttacggcgag
cccgaggccggcatgaagctcgccttctcgccctatacgctgcgcccgcgcattctccgc
cacatcgaggaggagatcgcccatgccaagaacggcgcgccggcggcgatctggatgaag
atgaactcgctggtcgatcctgatatcatcgacgcgctctaccgtgccagccaggcgggc
gtggaggtcgacctcgtcgtgcgcggcatctgctgcctgcgcccgcaggttcccggcctt
tccgacaatatccatgtcaaatccatcgtcggccgcttcctcgaacattcccgcatcttc
tgctttggcaacggccacgggcttccctccgacaaggcgctggtctatataagctccgcg
gacatgatgccgcgcaacctggaccggcgagtcgagacactggtgcctttgatcaaccgg
acggtgcatgagcaggttctctcgcagatcatgctgggcaatctcatcgataaccagcag
agctacgagatccttgcggacggaacgtcccggcgcatggaagtgcagcccggtactgag
ccgttcaacgctcagcactacttcatgaccaaccccagcctgtccggccggggcgaagcc
ctgaagtccagcgcaccgaaggcgatcgcgggctggcaaggccgccggaagaagtaa
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