Shinella sp. HZN7: shn_12560
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Entry
shn_12560 CDS
T04278
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_12560
01504 Antimicrobial resistance genes [BR:
shz01504
]
shn_12560
Transporters [BR:
shz02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
shn_12560
Antimicrobial resistance genes [BR:
shz01504
]
Gene variants
Tetracycline resistance genes
Transporters
shn_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_5
MFS_4
TRI12
Motif
Other DBs
NCBI-ProteinID:
ANH04788
UniProt:
A0A1A9G2M3
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All DBs
Position
complement(2614052..2615305)
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AA seq
417 aa
AA seq
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MIDARSTRRGLFLVFMIMFLDVIGIAIIMPVLPTYLRELTGDDISQAAIDGGWLLLVYAG
MQFLFAPFIGNLSDRFGRRPVLLACILTFAIDNLICALATSYWMLFVGRVLAGISGASFG
TAAAYIADVSTDETRAKNFGLMGIAFGTGFALGPVIGGLLGEFGPRIPFYGAAVLAFLNF
VAACFLLPESLEAAHRRRFELVRANPLGALLQMRNYPGVLWVGLVFFCYWLAHAVYPSVW
SFVSALRYGWSEGQIGLSLGVFGVGGAIVMAFVLPRVVPRLGEFRTAVVGLAFAVLGLAG
YAASVHGWMIYAVIVLTALESLADPPLRSIASARVPPSAQGELQGALTSVSSITTIIGPL
IFTQVFSHFTGPSAPVVFAGAPFALAAVMLLVGLVIFVVRLRGAGAGPNGNLAPERA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgccaggtccacccggcgcgggctctttctcgtcttcatgatcatgttcctc
gacgtgatcggcatcgccatcatcatgccggtgctgccgacctatctgcgcgagctgacg
ggtgacgatatcagccaggcggcgatcgacggcggctggctgctgctcgtctatgccggc
atgcagttcctcttcgcacccttcatcggcaatctctccgatcgcttcggccggcggccg
gtgctgctcgcctgcatcctcacctttgccatcgacaatctcatctgcgcgctggcgacc
agctactggatgctgttcgtcggccgggtgctggcgggcatcagcggcgccagcttcggc
acggccgccgcctatatcgccgatgtctccacggacgagacgcgggcgaagaatttcggg
ctgatgggcatcgccttcggcaccggcttcgcgctcgggcccgtcatcggcgggctgctc
ggcgagttcggcccgcgcatcccgttctacggggcggcggtgctcgccttcctcaatttc
gtcgcggcctgtttcctcctgccggaaagcctggaggcggcccatcgccgccgcttcgag
cttgtccgcgccaacccgctcggcgcgcttctccagatgcgcaactatccgggcgtgctg
tgggtcggcctcgtcttcttctgttactggctggcgcatgccgtctatccctccgtctgg
tccttcgtctcggcgctgcgttatggctggagcgaggggcagatcggcctgtcgctcggc
gttttcggggtcggcggggcgatcgtcatggccttcgtgctgccgcgcgtcgtgccgagg
ctcggcgagttccgcacggccgtcgtcggcctcgccttcgccgtgctcggccttgccggc
tacgccgcctccgttcacggctggatgatctatgcggtgatcgtgctgacggcgctcgaa
agcctcgccgatccgccgctgcgctccatcgcctcggcccgcgtgccgccctccgcgcag
ggcgagttgcagggggcgctgaccagcgtttccagcatcacgacgatcatcgggccgctg
atcttcacccaggtgttcagccacttcacgggaccgtccgcgccggtcgtctttgccggg
gcgccctttgcgcttgcagccgtgatgctcctggtgggcctcgtgatcttcgtcgtgagg
ctgcgcggcgccggggccgggccgaacgggaatctcgcgccggaacgcgcctga
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