Streptococcus intermedius B196: SIR_0708
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Entry
SIR_0708 CDS
T02830
Name
(GenBank) putative ABC transporter
KO
K18217
ATP-binding cassette, subfamily B, tetracycline resistant protein
Organism
sib
Streptococcus intermedius B196
Pathway
sib02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SIR_0708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sib02000
]
SIR_0708
01504 Antimicrobial resistance genes [BR:
sib01504
]
SIR_0708
Transporters [BR:
sib02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SIR_0708
Antimicrobial resistance genes [BR:
sib01504
]
Gene variants
Tetracycline resistance genes
Transporters
SIR_0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_15
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_22
MMR_HSR1
AAA_29
nSTAND3
AAA_30
ATP-synt_ab_C
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AGU76076
UniProt:
T1ZEF4
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All DBs
Position
715943..717679
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AA seq
578 aa
AA seq
DB search
MSIISRLLKELRVVRTAFFFAVGIAVLATVTSQLSPLCLRNMIDGPLTQIGSGKDRQVQL
LQLAGLYIIVVVLGSVLTYLGDRLLAHCGNKVAEHLRNEAYQVMQNLPISYFDDKPAGKI
ATRIVNDTETLRRQFYASLVSVLIQVLRIVFTYALLFYLSPLAASVLLLLLPAFYGIQVF
YKKLTDKPMKDFYDSRSDINNQVNELMHGASLIQLYHQEKTVLSEFNATARKMSQADKQI
VWVSALSSWPLTEFLKNTVLAVILTIVGQQFLGGRNVITAGVLFIYLNYIINLFEMMGFL
VRLFPNVQRSLETGKRVLELLDQPQEEDVKSQLAVVKGQVTFEHVSFAYEKGKTVLHNIS
FKAKKGETVALVGHTGSGKSSIMNLLYRFYDPKKGKIYVDQQDIQQYSRESLRSHMGIVL
QDPYLFTGTLATNVAMSHSGINREKVLESLEKVGAGDLLARCKEGIDEPVKDKGAAFSSG
ERQLISFARALYANPQILILDEATSHIDTETEELIQKAMAVVKEGRTTFIIAHRLSTIQE
ADQILVISEGKIVERGQHDTLVKQNGIYAQMSRLQQQV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcattagtcgtttattaaaagaactaagagttgttcgaactgcattctttttt
gcggttggaattgctgttttagcaacggtgactagccaactgtctcctctctgtttgaga
aatatgatagacggaccgcttacacagattggaagcggaaaagatcgtcaggttcagctt
ttgcaattagctggattatacataattgttgtagttttggggagcgtcctgacttactta
ggtgatcgccttttagcgcattgtggaaacaaagtagcagaacatctgaggaatgaagct
tatcaggttatgcaaaatttgccgatttcttactttgatgataaaccggcaggtaagatt
gcaaccagaattgtaaatgatacggaaaccttacgaagacaattttatgctagtttggtt
agtgttttgattcaagttcttcggattgtttttacctacgctctattgttttaccttagt
ccgcttgctgcctcggtacttttgctattgcttcctgctttttatgggatacaagtattt
tataaaaaactaacagacaagccgatgaaagacttttatgattcacggagtgatatcaat
aatcaagtgaatgaattgatgcatggagccagcttgatacagttatatcatcaggaaaaa
acagttctttcagaatttaatgcaactgctcgaaaaatgagccaagctgataaacaaatt
gtatgggtaagtgctctttcgtcttggccattaacggaatttttaaaaaatacagtgctt
gctgtcattttgacgatagttggccagcaatttttaggcggtcgcaatgtcattaccgct
ggtgtactgtttatctatctcaattatattatcaatttatttgagatgatgggttttctg
gttcggcttttcccaaatgtacaacgatcattggaaacaggaaaacgagttttagaattg
ttagatcaacctcaggaagaggatgtaaaatcacagttggcagttgttaaaggacaagtt
acatttgaacatgtgagctttgcatatgagaaaggcaagacagttctgcacaatattagt
tttaaagcaaagaaaggagagacggttgctttggtaggacataccggctctggaaaatct
tctatcatgaacctactttatcgtttctacgatcctaaaaaagggaaaatctatgttgat
caacaagatattcaacaatattctcgtgaaagtcttcgtagtcacatggggattgttttg
caagatccttatctattcacaggaacactagcaactaatgtagctatgagccattcaggc
atcaatcgtgaaaaagttttggaatctttagaaaaagtcggtgcaggggacttgctggct
cgttgtaaagaaggaattgatgagcctgtaaaggataaaggggcagcattttcaagcggt
gaacgtcaactgatttcatttgctcgagctctctatgctaatcctcaaattttaatattg
gatgaagcaacttctcatattgatacagaaaccgaagaactgattcaaaaagcaatggct
gttgtaaaggaagggagaacaacttttatcattgctcatcgtttatcaaccattcaagag
gcagatcaaatcctggttatttctgaaggaaagattgtagagcgagggcaacacgacaca
ttggtaaaacaaaatgggatctatgctcaaatgagccgtctccagcaacaagtataa
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integrated database retrieval system
