Streptococcus intermedius JTH08: SCIM_1329
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Entry
SCIM_1329 CDS
T02156
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCIM_1329 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sie03021
]
SCIM_1329 (rpoE)
03400 DNA repair and recombination proteins [BR:
sie03400
]
SCIM_1329 (rpoE)
Transcription machinery [BR:
sie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCIM_1329 (rpoE)
DNA repair and recombination proteins [BR:
sie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCIM_1329 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Glypican
Motif
Other DBs
NCBI-ProteinID:
BAM23983
LinkDB
All DBs
Position
complement(1515477..1516064)
Genome browser
AA seq
195 aa
AA seq
DB search
MELEVFAGQEKSELSMIEVARAILETRGRHHEMYFNDLVNEIQNYLEKSNSDIREALPLF
YTELNVDGSFISLGDNKWGLRSWYAIDEVDEEIITLEEDNEEAPKKRKKKRVNAFMDGDE
NAIDYNDDDPEDEDSYEADPALNYDEDNSDDEKSEVEAYDAEINEIAPDDLDEEVELNEE
DEEYSDDEVDSEDEE
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagaagtatttgctggacaagaaaaaagtgagctttctatgattgaagtggcg
cgtgctatcttagagacacgtggtcgtcatcatgaaatgtattttaacgatcttgtcaat
gaaattcaaaattaccttgaaaaatcaaatagtgatattcgtgaagcattgccactcttt
tatacagaattgaatgtggacggtagtttcatttctctaggggataacaaatggggcttg
cgttcctggtatgccattgacgaagtagatgaagaaatcattacacttgaagaagataat
gaagaagctcctaagaaacggaagaagaagcgtgtgaatgcctttatggacggagatgaa
aacgccattgactataatgacgatgatccagaagacgaagattcatacgaagcggatcct
gctctcaattatgatgaggacaattcagacgatgagaaaagcgaagtggaagcttacgat
gctgaaattaacgaaattgcacctgatgatttagatgaagaagtcgaactcaatgaagaa
gatgaggagtactcagatgatgaggtggattcagaggatgaagaatag
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integrated database retrieval system
