Ruegeria pomeroyi: SPO0349
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Entry
SPO0349 CDS
T00215
Symbol
mdh
Name
(GenBank) malate dehydrogenase, NAD-dependent
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00020
Citrate cycle (TCA cycle)
sil00270
Cysteine and methionine metabolism
sil00620
Pyruvate metabolism
sil00630
Glyoxylate and dicarboxylate metabolism
sil00680
Methane metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Module
sil_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sil_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sil_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPO0349 (mdh)
00620 Pyruvate metabolism
SPO0349 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
SPO0349 (mdh)
09102 Energy metabolism
00680 Methane metabolism
SPO0349 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SPO0349 (mdh)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SPO0349 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
3HCDH_N
F420_oxidored
Glyco_hydro_4
DUF357
ThiF
Motif
Other DBs
NCBI-ProteinID:
AAV93667
UniProt:
Q5LXE1
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All DBs
Position
complement(363558..364520)
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AA seq
320 aa
AA seq
DB search
MARPKIALIGAGQIGGTLAHLVALKELGDVVLFDIAEGTPEGKALDIAESGPSEGFDAKL
KGTQSYADIAGADVCIVTAGVPRKPGMSRDDLLGINLKVMKSVGEGIRDNAPDAFVICIT
NPLDAMVWALQQFSGLPANKVCGMAGVLDSARFRHFLAEEFNVSMKDVTAFVLGGHGDTM
VPSVRYSTVAGIPLPDLIKMGWTSQEKLDAIVQRTRDGGAEIVGLLKTGSAYYAPATSAI
EMAEAYLKDQKRVLPCAAYCNGELGVKGMYVGVPTVIGAGGIERIIDVSLTKEEQDMFDN
SVNAVKGLVEACKGIDGSLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggccagacccaagatcgcgcttatcggcgcaggtcagatcggcggcacgctcgcccac
ctcgtcgcgctgaaggaactgggcgatgttgtcctgttcgacatcgccgaaggcacgccc
gagggcaaggcgctcgacatcgcggaatccggcccctccgaagggttcgacgccaagctc
aagggcacccagtcctatgccgatatcgctggcgccgatgtctgcatcgtcaccgccggt
gtgccgcgcaagccgggcatgagccgcgacgacctgctgggcatcaacctcaaggtcatg
aagtcggtcggcgaaggcatccgcgacaacgcgcctgacgcgttcgtcatctgcatcacc
aacccgctcgacgcgatggtctgggcgctgcagcagttctcgggcctgcccgcgaacaag
gtctgcggcatggcaggcgtgctcgactcggcccgtttccgccacttcctggccgaagag
ttcaacgtgtcaatgaaagacgtcaccgcattcgtgctgggcggccatggcgacaccatg
gtgccttcggtgcggtattcgaccgttgccggcatcccgctgcccgacctgatcaagatg
ggctggaccagccaggagaagctggacgccatcgtgcagcgcacccgtgacggcggcgcc
gagatcgttggcttgctgaagaccggttcggcctattacgcacccgccaccagcgccatc
gagatggccgaggcctatctgaaagaccagaagcgcgtcctgccctgcgccgcctattgc
aacggcgaactgggcgtaaagggcatgtatgtgggcgtgcccaccgtgatcggcgccggc
ggcatcgaacgcatcatcgacgtgtcgctgaccaaggaagagcaggacatgttcgacaat
tcggtcaacgcggtcaaaggcctggtcgaggcttgcaaaggcatcgacggctcgctggcc
tga
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