Ruegeria pomeroyi: SPO0455
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Entry
SPO0455 CDS
T00215
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPO0455 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sil01007
]
SPO0455 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sil03016
]
SPO0455 (lysS)
Enzymes [BR:
sil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SPO0455 (lysS)
Amino acid related enzymes [BR:
sil01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SPO0455 (lysS)
Transfer RNA biogenesis [BR:
sil03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPO0455 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
tRNA-synt_1c
tRNA-synt_1e
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
AAV93773
UniProt:
Q5LW87
LinkDB
All DBs
Position
465480..467126
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AA seq
548 aa
AA seq
DB search
MLHWHNRTAGPGAWGALPSPMETDMSNSRELALASKAWPFEEARRVLKRYEKAPPEKGYV
LFETGYGPSGLPHIGTFGEVARTTMIRRAFHEISDIPTRLICFSDDLDGMRKVPGNVPNQ
DMLREHLQKPLTSVPDPFGTHESFGHHNNAMLRRFLDTFGFEYEFYSATEFYRSGQFDEI
LLRAAERYDDIMKIMLKSLREERQQTYSIFLPIHPETGRVLYVPMKEVNAKDGTITFDDE
DGREWTLPVTGGNVKLQWKPDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGVPAPE
HFTYELFLDENGQKISKSSGNGVSIDEWLTYASSESLAYFMYQKPKTAKRMYFDVIPKAV
DEYHQQLRAYPTQDLAAQLNNPVWHIHGGDVPASTLIVPFGMLLNLASVSGAEDKEALWG
FIRRYAPEASAESHPDLDQAAGFAVRYFNDFVKPTRVYRAPIEVEREALEELRAQLAAYD
GPVEDEALQSIVYAVGRDRFDPLRAWFGALYEVLLGASQGPRFGGFIALYGIPETIALID
KALAGELV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactggcacaataggacagccgggccgggcgcatggggcgcccttccttccccg
atggagaccgacatgtccaactcgcgtgaactcgcacttgcgtccaaggcctggcccttt
gaagaagcgcggcgggtgctcaaacgctatgagaaggcgccgccggagaagggatatgtt
ctgttcgagaccggttatggcccctcgggtctgccccatatcggcacattcggcgaggtg
gcgcgcaccacgatgatccgccgcgcgttccacgagatcagcgatattccgacccggctg
atctgtttctcggacgatctggacgggatgcgcaaggtgccgggcaacgtgcccaaccag
gacatgctgcgcgagcatctgcaaaagccgctgacctcggtgcccgatccgttcggcacc
catgagagctttggccatcacaacaacgccatgctgcggcggtttctcgatacgttcggg
ttcgagtacgagttctattcggcgaccgagttctacaggtccggccagttcgacgagatc
ctgctgcgcgccgcggaacgttatgacgacatcatgaagatcatgctgaagtcgctgcgc
gaggagcggcagcagacctattcgattttcctgccgatccaccccgagacggggcgggtt
ctgtatgtgccgatgaaagaggtgaacgccaaggacggcaccatcacctttgacgacgag
gacgggcgcgaatggacgctgccggtgacgggcggcaacgtgaaattgcagtggaagccc
gatttcggcgcgcgctgggcggcgctgggcgtcgatttcgagatgtacggcaaggatcac
tcgaccaacacgccgatctatgacggcatctgccgggtgctgggcgtgcccgcgcccgag
catttcacctatgagctgtttctggacgagaatgggcagaagatttccaagtcgagcggc
aacggggtgagcatcgacgaatggctgacctatgccagctcggaaagccttgcctatttc
atgtatcagaagccgaagaccgccaagcggatgtatttcgatgtgatccccaaggcggtg
gacgagtatcaccagcaactgcgcgcctatccgacccaggatctggcggcgcagctgaac
aacccggtgtggcatatccacggcggcgatgtgcctgcctcgaccctgatcgtgccgttc
gggatgctgttgaacctggccagcgtgtcgggagccgaggacaaggaggcgctgtggggc
ttcatccgccgctatgcgcccgaggccagcgccgagagccatcccgatctggatcaggcg
gccgggtttgcggtgcgctacttcaacgatttcgtcaagccgacgcgggtctaccgggcg
ccgatcgaggtcgagcgcgaggcgctggaggagctgcgcgcgcaactggccgcctatgac
gggccggtcgaggatgaggcgctgcaatccatcgtctatgcggtgggccgcgaccggttc
gacccgctgcgcgcctggttcggtgcgctttacgaggtgctgctgggcgcgtctcagggc
ccgcgctttggcgggttcatcgcgctttacggcattcccgagaccatcgcgctgatcgac
aaggcgctggcgggcgagctggtctga
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