Ruegeria pomeroyi: SPOA0432
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Entry
SPOA0432 CDS
T00215
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00362
Benzoate degradation
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
sil01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SPOA0432 (pcaB)
Enzymes [BR:
sil01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
SPOA0432 (pcaB)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
AAV97563
RoseoBase_p:
pcaB
UniProt:
Q5LKE9
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Position
megaplasmid:complement(479797..481134)
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AA seq
445 aa
AA seq
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MAASVFDSAHLARLFPAGDAGRLFTDGAELRAMLLVEGMLAKAQGALGLIPVESAGAIHR
AAMEIHLDPGALAEATGANGVSVPALVAAFRSEMQAPEHAQYVHWGATSQDIIDTGLMLR
LRQAVSVLERDLAAVLETLAALAESHADLPMAGRSYAQHATPTSFGAVVASWGAPLLDLL
RELPGLRRDCLLVSLSGAAGTGAALGPEVAQLRADLAQLLNLADPGRSWHTDRTPVLRLA
EWCTRIALALGKLGEDAIELSQTGIAEITLGGGGASSTMPQKQNPVGASALVALSRQVPG
LLAVLHGAGVHRHQRDGAAWFTEWMCLPQIVLGAAASVQITQRLLPGLAPCPEAMAAALD
TNYGTIHAEAVNFALAAHLPRPEAQAAVKTLCAEAMESRTPLRELIARDWPQLDAAALTD
PSRQLGAAPDEARAFAARVRSQGAT
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatcagtgtttgacagcgcgcatctggcgcgcctttttcctgcgggcgatgcc
gggcggctgttcaccgacggggccgagttgcgcgcgatgctgctggtcgaggggatgctg
gccaaggcgcaaggcgcgctggggctgatcccggtcgagagtgccggtgccatccaccgc
gcggcgatggaaatccacctcgaccccggcgcactggccgaggcgacaggggcaaacggg
gtcagcgtgccggcgctggtcgccgcctttcgcagtgaaatgcaggcgcccgaacatgcg
caatatgtccattggggcgccacttcgcaggatatcatcgacaccggcctgatgctgcgg
ttgcgtcaggcggtctcggtgctggagcgggatctggctgcggtgctggaaacgctggcc
gcgcttgccgagagccatgccgatctgcccatggcagggcgcagttacgctcagcatgcc
acgcccaccagctttggcgcggtggtggcgtcctggggggcgccgctgcttgacctgttg
cgcgaactgccgggtctcaggcgcgattgcctgctggtgtcactgtcgggcgcagccggc
accggcgccgcgctggggcccgaggtggcgcaactgcgcgccgatctggcccaacttctg
aacctcgccgatcccgggcgcagctggcataccgaccgcaccccggtactgcgtctggcc
gaatggtgcacccgcatcgcgctggcgcttggcaagctgggcgaggatgcgatcgagctg
tcccagaccggcattgccgagatcacgctgggtggtggcggcgcgtcctcgaccatgccg
cagaaacagaacccggtcggcgcctcggcgctggtggccctgtcccggcaggtgccgggc
ctgttggcggttctgcatggcgcgggcgtgcaccggcaccagcgcgacggcgccgcctgg
ttcaccgaatggatgtgcctgccccagatcgtgctgggcgccgccgcctcggtacagatc
acccagcgcctgctgcccgggctggccccctgccccgaggccatggccgccgcgctcgac
accaactatggcaccatccatgccgaggcggtcaactttgcgctggccgcgcacctgccc
cgccccgaggcacaagccgccgtcaagaccctctgcgccgaggcgatggaaagccggaca
ccgctgcgcgagctgatcgcgcgcgactggccgcagctggacgccgccgcgctgaccgac
ccgtcccggcaactgggcgccgcccccgacgaggcccgggcctttgccgcgcgggtccgg
tcgcaaggggccacttag
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