Sphingopyxis indica: KNJ79_18280
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Entry
KNJ79_18280 CDS
T09492
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
sina
Sphingopyxis indica
Pathway
sina00362
Benzoate degradation
sina00624
Polycyclic aromatic hydrocarbon degradation
sina01100
Metabolic pathways
sina01120
Microbial metabolism in diverse environments
sina01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KNJ79_18280 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
KNJ79_18280 (pcaH)
Enzymes [BR:
sina01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
KNJ79_18280 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
WOF43054
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Position
complement(3884540..3885253)
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AA seq
237 aa
AA seq
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MTDMLPYNHEDAGAPPSLFPDYRSSIQRAPSQPLVRIPQTLTEMTGPAGCWDRLMGSAMA
DLTAHHKGSPLGQRIIVSGRVLDEHGRPVPNTVMEIWQANSAGRYIHSKDNWDAPLDPNF
TGAGRVVTDEQGRYRYVTIRPGAYPWGNHRNAWRPAHIHLSLLGPAFATRLVTQLYFPDD
PLIEIDPIANAVPLPYRQRMVARFDMKTTQPNWALGYSFDVVLRGRDQTPFEGHHDR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatgctcccctataatcatgaggacgcgggcgcgcctccgtcgctctttcct
gactatcgttcgagcatccagcgcgcgccttcacagccccttgtccggattccccaaaca
ctcaccgagatgaccgggcctgccggctgctgggatcgactaatggggtccgcgatggcg
gatctcaccgcacaccataagggctcgccgcttggtcaacgaatcatcgtgtcgggccgg
gtgttggacgagcacgggcgaccggtgcccaacaccgtgatggagatttggcaggcgaat
tcggctggccgctacattcacagcaaggataactgggacgcgccgctcgatcccaatttc
acgggcgcaggtcgcgtcgttaccgacgaacaaggccgctatcgctatgttacaatccgt
cctggggcctatccttgggggaaccataggaacgcctggcgcccagcgcacatccacctg
tcgcttcttggtccggctttcgcgacgcggctggttacccagctctatttccccgacgac
ccgctgatcgagatcgatccgatcgccaatgccgttccgctaccctatcgccagcgcatg
gttgcacggttcgatatgaaaacgacgcagcccaattgggcgctcggttatagtttcgac
gtggtccttcggggccgtgaccaaactccctttgaggggcaccatgatcgctga
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