Sphingobium indicum B90A: SIDU_07950
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Entry
SIDU_07950 CDS
T04604
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinb03009
]
SIDU_07950
Enzymes [BR:
sinb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SIDU_07950
Ribosome biogenesis [BR:
sinb03009
]
Prokaryotic type
ribosomal protein modification factors
SIDU_07950
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
APL96297
UniProt:
A0A1L5BTX1
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Position
1669146..1670513
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AA seq
455 aa
AA seq
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MATKIPEAPKVGMVSLGCPKALVDSERILTKLRSDGYQMSADYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGNEAELIRAKFPQVLAVTGAHQYEAVVNAVHEASPP
IPNAFVDLVPEGGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLASRRIDAVLREAEK
LVHAGTKELLIISQDTSAYGVDTRHEARQWKGREVRAHMTDLARELGQLRTAEGTPPWVR
LHYVYPYPHVDHVIPLMAEGLLTPYLDIPFQHAAPSVLKAMRRPANEAKVLDRIRKWRDI
CPDIAIRSSFVVGFPGETEADFDYLLQWLGEAQLDRVGAFRFEPVEGAAANDPPGAVPEE
VKEERYQRIMERTAAISAARLQAKVGRVLPVIIDEVGEADEDGSIGATARSQADAPEIDG
NVFLRDVGEGLAPGSILNVLIEDADEHDLYGVPSV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaattcccgaagcgccgaaggtcggcatggtgtcgctgggctgtcccaag
gcgctggtcgacagcgagcgcatcctgaccaagctgcgttccgacggctatcagatgtcc
gcagactatgccggcgccgacgtcgtgctggtcaatacctgcggattcctggattcggcc
aaggaggaatcgctggaagccattggcgaggcgatcgcggagaatggccgcgtcatcgtc
accggctgcatgggcaatgaggcggaactgatccgcgcaaaattcccgcaggtgctggcc
gtgaccggcgcgcatcaatatgaggccgtggtgaacgcggtgcatgaagcctcgccgccc
atacccaacgccttcgtcgacctggtgccggagggcgggctgaaactgacgccgcgccac
tacagctatctcaagatttcggaaggctgcaaccatcgctgctccttctgcatcatcccc
tcgctgcgcggcgacctggccagccggcgcatcgacgccgtgctgcgcgaggcggaaaag
ctggtgcatgccggaacgaaggaactgctgatcatcagccaggacacctccgcttacggg
gtcgacacccggcatgaggcgcgccaatggaagggacgcgaggttcgcgcgcacatgacc
gacctggcccgcgagctggggcagcttcgcaccgcggagggcacgccgccctgggtccgg
ctgcactatgtctatccctatccccatgtggatcatgtgatcccgctgatggccgagggg
ctgctgacgccctatctcgacatcccgttccagcatgccgcgccttcggtcctcaaggcc
atgaggcgcccggcgaacgaagcgaaggtgctggaccgcatccgcaaatggcgggacatc
tgccctgacatcgcgatccgttcctccttcgtcgtcggcttccccggcgagacggaggcg
gatttcgactatcttctccagtggctgggcgaggcgcaactcgaccgcgtgggcgccttc
cgcttcgagccggtcgagggcgcggcggccaacgacccgcccggcgcggtgccggaggag
gtcaaggaagaacgataccagcggatcatggaaaggaccgccgccatctccgccgcccgc
ttgcaggcgaaggtgggccgcgtgctgcccgtcatcatcgacgaggtgggcgaagcggac
gaggacggctccatcggcgccacggcgcgcagccaggccgacgcgccggagatcgacggc
aatgtcttcctgcgcgatgtaggagaagggctggcgccgggcagcatcctgaacgtgctg
atcgaggatgcggacgagcatgacctttacggagtgccgtcggtttag
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