Stenotrophomonas indicatrix: DAIF1_17910
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Entry
DAIF1_17910 CDS
T07128
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00362
Benzoate degradation
sinc01100
Metabolic pathways
sinc01120
Microbial metabolism in diverse environments
sinc01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DAIF1_17910 (pcaB)
Enzymes [BR:
sinc01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
DAIF1_17910 (pcaB)
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GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
QBR44227
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All DBs
Position
1936405..1937748
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AA seq
447 aa
AA seq
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MSHFPTLLGGLFGDPAVDAVFRDEARLQAMLDVERALARAQVQCGVIPAAALAPIEAACS
ADLYSLPALSAATALAGNPAIPLVKALTAQVRANDAEAARWVHWGATSQDIIDTGAVLQL
RAAVSQVQARLRVLCMALARLAEAERGTGLPGRTLLQQAVPVTFGLKAAGWLDALQRSQR
RLDALAADTLVLQFGGAAGTLASLQTRGLDVAEALAAELQLPLPALPWHTARDRIAEFGS
VFALLTGSLGKIATDIVLLMQSEVAEAFEPAGEGKGGSSAMPHKRNPVGCVAAIAAATRV
PGLLSTLFTAMPQPHERAAGQWHAEWDTVPEIVRLCAGSLAQVDVVVQGLQLDRERMRQH
LDSHGGLLYAEAVAVTLGERIGKPAAHALVEQAARQALAQSQHLRVVLGQMPEVTAQLSA
AQLDALFAADSWRGMADTWIDRVLARG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagccacttcccaacgctgctgggcggtctgttcggcgaccccgccgtcgacgccgtg
ttccgcgatgaagcacgcctgcaggcgatgctcgatgtcgaacgcgctctggcgcgcgcg
caggtgcagtgcggggtgattcccgcagccgcgctggcaccgatcgaagcggcctgcagc
gccgatctgtattcgttgccggcgctgtcggcagccaccgcactggctggcaatccggcc
attccactggtcaaggcactcaccgcgcaggtcagggcgaacgatgccgaggccgcgcgc
tgggtgcactggggcgccaccagccaggacatcatcgataccggcgcggtgctgcagctg
cgcgcggcagtcagccaggtgcaggcgcgcctgcgcgtgctgtgcatggcgctggcgcgg
ctggctgaggccgagcgcggcaccgggctgcccggacgcacgctgctgcaacaagcagtg
ccggtgaccttcggcctgaaggcggccggttggctcgacgccctgcagcgcagccagcgc
aggctggatgcgttggccgcagacaccttggtgctgcagttcggcggtgccgccggcacc
ctggcctcgctgcagacgcgcgggctggacgtggccgaagccctggctgccgagctgcag
ttgccgctgccggcattgccctggcacaccgcgcgtgaccgcattgccgagttcggcagc
gtgttcgcactgctgaccggcagtctcggcaagatcgccaccgacatcgtgctgctgatg
cagtccgaggtggccgaagccttcgagccggcgggcgagggcaagggcggttcctcggca
atgccgcacaagcgcaatccggtgggctgcgtggccgccattgccgccgccacgcgcgta
ccgggcctgctgtccacgctgttcactgccatgccgcagccgcacgagcgcgcagcaggc
caatggcacgccgaatgggacaccgtgccggagatcgtgcgcctgtgtgcgggcagcctg
gcccaggtggatgtggtggtgcagggcctgcagctggaccgcgagcgcatgcgccagcac
ctggatagtcacggcggcctgctttacgccgaagccgttgcggtcaccctgggcgagcgc
atcggcaagccggccgcacatgccctggtggaacaagcggccaggcaggcgcttgcgcaa
tcgcagcacctgcgcgtggtgctggggcagatgcccgaagtcaccgcgcagctttccgcc
gcacaactggatgccctgttcgccgcagacagctggcgcggcatggccgatacctggatc
gaccgcgtgctcgcgcgcggctga
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