Sesamum indicum (sesame): 105158680
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Entry
105158680 CDS
T04135
Name
(RefSeq) exopolygalacturonase clone GBGA483
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105158680
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105158680
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
105158680
NCBI-ProteinID:
XP_011073814
UniProt:
A0A6I9STB6
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Position
LG3:complement(17949542..17952299)
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AA seq
394 aa
AA seq
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MAGIWIWMLMMAMVAGNHAAVFDVKSYGAKADGKSDDSKAILDAWKAACNSGQASNVLIP
KGTYMVGSMIMEGPCKAPITIEANKARFVAPINPNQLRARNGWINFVGIDRFGLQGGRFD
GQGELAWHQNNCVGTGKCGSMPINLSFNRITNALIHSITSYDSKQYHIDVLSCKNVTFRS
IRISAPDQSLNTDGIHIVRSSGINVTEADIKTGDDCVSVGDGSQQVNIEKVKCGPGHGIA
IGSLGKYNNEEPVVGVTVKNCTITHTMSGVRVETWPASPSEGVARDLHFQNIVMNNVSTP
ISIDQEYCPYKCDKKVPSRVKISDVSFDDIRGTSASKVAVRLRCSSASPCENVGLSNINL
AYHGSDGKATSECANVKPKVTGQLFPPACAVSSA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatttggatttggatgctgatgatggctatggtggctggaaaccatgctgct
gttttcgatgttaagagttatggtgccaaggccgacggcaagtccgatgatagcaaggcg
atcctggatgcctggaaagcggcgtgcaattcggggcaggcgagcaatgttttgatccca
aaaggaacctatatggttggttcgatgataatggagggtccctgtaaagctccgattaca
atcgaagcgaataaagcccgattcgttgccccgattaacccgaaccaattgagggcgcgt
aatggttggatcaacttcgtaggcatagacaggtttggcctccaaggaggaaggtttgat
gggcaaggagagctcgcctggcaccagaacaactgtgtgggaacaggaaaatgtggttcc
atgcctattaatttgagcttcaacagaatcaccaacgctctgatccactccatcacatcc
tacgatagcaagcaataccacattgacgtgttgagctgcaagaacgtgacattccgaagc
atcagaatctcggctccagaccaaagcctgaacacggacggcatacacatcgtgcgttcg
agcgggatcaacgtgaccgaggctgacataaaaactggcgacgactgtgtgtccgtgggc
gacggcagccaacaggtgaacatagagaaagtgaagtgcgggccgggccacggcatcgcc
atcggaagcctgggcaagtacaacaacgaagaaccagtggttggagtaacagtgaagaat
tgcaccatcacccacactatgagtggagtgagggtggagacatggcctgcttctccttca
gagggtgtagcacgtgacttgcactttcagaacatcgtcatgaacaacgttagcacacct
atttcgatcgatcaagaatattgcccttacaagtgcgacaaaaaggtgccgtcgcgtgtt
aagatcagtgacgtcagtttcgacgatattcggggaacatcggcaagcaaagtggcagtg
aggcttcgatgcagcagtgcgagtccatgcgagaatgtggggttgagtaacataaatctg
gcctatcatggaagcgatggaaaagccacatctgaatgtgccaatgtgaagccaaaagtg
acagggcagctgttccctccagcttgtgcagtttcctctgcttga
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