Sesamum indicum (sesame): 105167567
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Entry
105167567 CDS
T04135
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105167567
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105167567
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
105167567
NCBI-ProteinID:
XP_011085642
UniProt:
A0A6I9TIX2
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Position
LG8:1571736..1573300
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AA seq
365 aa
AA seq
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MGSDNCVSWSWVMIVFMLLSIWNVDVDGQSTNFIVTDFGAVADGKTDSRQAFQDAWKSAC
QADGGVVSVPQGTFRVSGSAVFEGPCNGQTGFSVDGTVIASDDPTLDKDYWITFHKVDAL
TVSGYGVFDGNGASSWSSCNGVKNCNPLPPVPPKTAPTLMESTPPPSRSNGVNIFDSHIA
TGDDCISMGDGSRNVNISGVWCGPGHGISIGSLGKYEGEEDVSGITVRGCTLTNTDNGLR
IKTWAPSLSSTVVSDVTYTDINVNNVKNPIIIDQYYCPGGSCRHEEESSVAIKGVKYINI
RGSSATETGVNMQCSKSYPCQDIELRGLELTYNGQPTTASCSSADGIFQGTDQVPSQCSS
QYACF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagacaattgtgtcagctggtcatgggtcatgattgtgttcatgttgttgtcc
atttggaacgtggatgttgatggacaaagcacaaacttcattgtcacggattttggtgcc
gttgctgatggaaaaacagacagcagacaggctttccaggatgcctggaagagtgcttgt
caagctgacgggggcgtagtttcagtgccgcaagggacattccgtgtgagtggtagtgca
gtctttgaagggccatgcaacggccagacggggttttctgtcgatggcactgttatagct
tctgatgatcctacacttgataaagactattggatcacatttcataaggtggatgccttg
acagtttctggatatggtgtatttgatggaaatggagcctcgtcttggtcaagttgtaac
ggcgtcaaaaactgcaaccctttaccccccgtgcccccgaagacagccccaacactgatg
gaatccacacccccccccagccgctccaacggtgtaaacatctttgactcccatatagcc
acgggagatgactgcatatctatgggagacggaagtaggaatgtgaacatttccggagtc
tggtgcgggccgggacacggtattagcattgggagcctggggaagtacgagggagaggag
gatgtcagtggaattaccgtcaggggttgtactttgaccaacacggacaacggtctgagg
atcaaaacatgggcaccttctttatcgtccaccgttgtttctgatgttacatacactgac
atcaacgtaaacaatgtaaaaaatccaatcatcatcgatcaatactattgccccggtggt
tcctgcaggcatgaggaagagtcgagcgtggcaatcaaaggcgtaaagtacataaatata
cgggggagctcagcgacagagactggtgtgaatatgcagtgtagcaaaagttatccatgc
caagacatagagctgagggggcttgagctgacctacaatgggcaacccacaacagcatcg
tgctccagtgcagacggcatatttcaaggaaccgatcaagttccctcacaatgttcctca
caatatgcatgtttctga
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