Sesamum indicum (sesame): 105168089
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Entry
105168089 CDS
T04135
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105168089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105168089
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105168089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
CCDC-167
Motif
Other DBs
NCBI-GeneID:
105168089
NCBI-ProteinID:
XP_011086325
UniProt:
A0A6I9TRV1
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All DBs
Position
LG8:complement(9293526..9312318)
Genome browser
AA seq
2061 aa
AA seq
DB search
MPLFISEEEFQRCSGDAGLVAERADTFIRELYSQIETVKAEADAASITLEQTCSLIEQKY
VSLSAEHSSLQSQHSELNSSLEQRTSELAQLQSEKQQLVLQSIEKDGEIERLKREASELH
KSKRQLMELLEQKDLEVSEKNATIKSYLDKIVNLSENAASKEARVADLESELGRLQATSA
RALQEKELLERHNTWLNEELTAKVDSLIQLRKAHGELEADMNSKLADVENKFKESSSSLK
LHKNRVRELDEKLASTERELLSTKDAAAAAEERFSAEIATVSKLVDLYKESSEEWSKKAT
DLEGVIKALETHLNQIESDYKDRLEKEESARKEVEKESAGLKEKLQTTTAELETLRKENK
LQLLPLSSFTTDSWVNSVNTDEMGEDDRAIVPRIPSGVSGTALAASLLRDGWTLAKMYSK
YQEAVDALRHEQLGRKQTQAILERVLYEIEEKAGVIMDEREEHERLVEAYSALNEKLQHS
LSEHSTLQTTIQELKASLKRQERDYVVAQKEIGDLQKQVAVLLKECRDVQLRCGSVARYN
DDELITGPAVPLNAESNTENIISERLLTFKDINGLVEQNVQLRSLVRNLSDQIEEKEAEL
KDKYEKELQKHTEEAASKVNAVLLKAEEQATMIESLHSAVAMYKKLYEEEHKLRAHTTHP
QEAVPERGSMEIMPLRAISYDSSKEVQEQALERLKNLEEDLAKSRNDIISLRAERDKLAL
EAQFAQEKLARFMKEFEHQREEHNGLIARNVEFSQLVVDYQRKLRESAESVDVSNELSRK
LTMEVSILKHEKEILQNSEKRASDEVRSLSERVHRLQASLDTIQSTEEVREDARAIERRK
QEEYIHKIEREWAEAKRELQEERDNVRSLTLERESTLKNALRQVEELNKELASALQSVAI
AESKAAVAEARCSDLEKIMESGRTKDRDGADGPSSSTEKMLANFRDEIEKWRGEAQASKD
HMLQYKSIAQVNEEALKQMELAHENFRNEADEVKRSLEAELHSLRERINELESECKLKTE
EAISATAGKEEALAGALSEIANLKDDCSVKMSQIVVMESRISALKEDLEREHQRWRSAQD
NYERQVILQSETIQELTKTSQALASAQEETTELRKVVDALKTENIDLKSKWEIEKLAIEA
YKNEADKKYSEVNELNKMLHSRLEALHIRLAEKERGIASGSSSQSFADDDGLQNVVNYLR
RTKEIAETEISLLKQEKLRLQSQLEVALKSAENAQTSLNTELAKARASLFTDDEFKSLQL
QVRELTLLRESNMQLREENRHNFEECQKLREALQNVRIETENLEKLLRDRDTELEGYRKE
IEILKMEKVHLEKRTDELVEKCNNVDLDDYNRLKESFQQIQVSLRERDSQLEETKKLLSE
KQDAISLLERDLARSRTELNERETRINEILQAEASLKSEAEKMRRLSLQARRKSEQLLKE
KEEMSKEMQAFSKQLEEARQVKRNTVDLAGEQALREKEKEKDTRIQILEKTLERHREDLK
KEKEDHHKEKEKSQKIRKTIIESREIVTQQKTKLSDELKKHKEALRALQDEVEKLKNSGG
SQTESTSVGQDFSSTLLEDFASAYYQAVENFEQVAQPACGELDSATTDTPLDNASSAGAP
VGQAVTSLTQTPAVSAANIPPTRTNEERRLAVAKANIKMGRKLVRPNITKPKEPQGDVEM
SEADESNIGLSSQNTESQGNVTGLATASARKRPSASVSSDLQDEMLAPEETSSDTPAPLL
KKSKASESAQEGGEEPSAAPVKLSEVVPIEESSDDAGNLQQGINKEEHADAEREDFETAG
EQVEEPTTDEQTQAELLSDTGEVAEEKLDKPSETLVSDDQLRDQTEQDIQQIVTESGGER
EEGELVADFADNDGDSNVFNEMGASEIGEFQPEQSVERENSPIAEPLASASLEAGEIDPS
ETPEEDKNVDMTESMLDSSIKLNNNADQIAETSQVPGSSIATTTDEVSVSTSVDAAGSSE
QGGSAPTSSEQGGPAPTPDAGAKPVSPLNSSTTINLQERARQRAHLRQAGLIASSPSRAR
GRAIRGRGARGGRTPRGQSPS
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgtttatttcggaggaagaattccagcggtgctcgggggacgccgggctggtg
gcagagagggcggatacatttatccgggaactctacagtcaaatcgagacggtcaaggcg
gaggctgatgcggcgtccatcaccctcgagcaaacttgctctctcattgaacagaaatac
gtttccctttctgcggaacactcgtccctccagtctcagcactcggaactcaactcttcc
cttgaacagcgcacctctgaactcgcgcaacttcaatccgagaaacagcaactcgtgctt
caatctattgagaaagatggagagattgagaggctgaaaagggaagcatcagaactccat
aaatcaaagaggcagttgatggaactgttggagcaaaaggatttggaagtcagcgagaaa
aatgccaccattaagagttatcttgataagattgtcaatttgagtgagaatgctgcatca
aaagaagcacgagtggctgatctggagtctgaattgggacgactgcaggctacatctgcc
cgtgctttgcaggaaaaagagcttcttgagaggcataatacatggcttaatgaggagttg
acggctaaggttgacagtcttatccagctgcgcaaagctcatggagagcttgaggctgat
atgaattctaagcttgctgatgtagaaaataaatttaaggagagctctagttcattgaaa
ttgcacaagaatagagtgagggagttggatgaaaagcttgcatccacagaaagggagttg
ttgtcaactaaggatgcagctgcggctgcagaggagcgtttctctgctgaaatagctaca
gtaagcaagcttgtggacttgtataaggaaagttcggaggaatggtccaagaaggcaacc
gatcttgagggagtcattaaggctttagaaactcacttaaatcaaattgaaagtgattac
aaagataggcttgaaaaggaagagtctgcaaggaaggaagtggaaaaggagtctgctggt
ctaaaagagaagcttcagactaccacagcagaattggaaacattaaggaaagaaaacaag
ctacaacttcttcctctgagtagttttacaaccgactcgtgggtaaactctgttaatact
gatgaaatgggtgaagatgatcgagcaattgtacctagaatcccttctggcgtttcggga
acagcattagctgcttcacttctcagggatgggtggactctggctaaaatgtattccaaa
taccaagaagctgttgatgcactacgacatgagcaactgggaagaaaacaaacccaagct
atcttggagcgtgtgctttatgaaatagaagaaaaagcaggagtgatcatggatgaacga
gaggaacatgagaggcttgttgaggcatattctgctttaaatgaaaaactgcagcattca
ctgtctgagcattctactttgcagacaaccattcaggagctgaaggctagcttaaagagg
caggaacgtgactatgtggttgctcagaaggagataggtgacctccaaaagcaggtggct
gtccttttaaaggagtgtcgagatgttcagttgcgttgtggatctgttgctcgttataat
gatgatgagctgatcactggtcctgctgtacctttgaatgctgaatctaatactgaaaat
atcatatctgaacggctgttgaccttcaaggatataaatggattagttgaacaaaatgtc
cagttgcggagtcttgttcgcaacctttctgaccaaattgaggagaaagaagcagagttg
aaggataagtatgagaaagagcttcagaagcatacagaggaggctgcatctaaagttaac
gcagtattactgaaagcagaggaacaggcaacaatgattgaatcacttcatagcgctgtg
gcgatgtacaagaaattatatgaagaggaacataaacttcgtgctcatactactcatcct
caagaagcagttccagaacgaggaagcatggagatcatgcctttacgtgcaattagttat
gattcatcaaaagaagtgcaagagcaggctttggagcgcctgaagaatcttgaagaagat
ttagctaaatctaggaatgacataatatcactgcgagctgaacgtgacaagttagcccta
gaagcacaatttgcacaagaaaaacttgcccgatttatgaaggaatttgagcatcagaga
gaagaacataatggacttatagccagaaacgttgagttctcacagttggtagttgactac
cagagaaagctgcgtgaaagtgctgagtcggtggatgtgtccaatgaactttcgcgaaag
ttaacaatggaggtatcaatattgaagcatgaaaaggaaatactgcagaactctgaaaag
agagcatctgatgaagttcgtagtttgtcagagagagttcaccggttgcaggctagttta
gacaccatacagagtaccgaggaagtgcgcgaggatgccagagctattgaaaggagaaag
caagaggagtatatccacaaaattgagagagaatgggctgaggcaaagagggagcttcaa
gaagagcgagataatgttcggagtctcactcttgagcgtgaaagcaccttgaagaatgct
ttgagacaagttgaggaattgaataaagaattggctagtgccttgcagtcggtggcaatt
gctgagtctaaggctgcagttgcagaggctcgttgctctgatttggaaaagattatggaa
tctggaagaacaaaggatcgtgatggtgcagatggtccatcctcttctactgaaaagatg
ttggcgaatttccgggatgaaattgaaaaatggagaggggaagcacaggctagcaaagat
cacatgcttcagtacaagagcatagcgcaagtcaatgaagaagcactcaaacagatggag
ctggcccatgagaattttagaaatgaggctgatgaagttaagagatctttagaagctgag
cttcattcacttagagaacgcatcaacgagcttgaaagtgaatgtaaactgaagaccgag
gaagcaatttctgcaactgctgggaaagaagaggcccttgctggtgctttgtctgaaatt
gctaatctgaaggatgattgttctgttaaaatgtcacagattgtggtaatggaatcaaga
atctctgccttaaaagaggatttggagagagagcaccaaagatggcgaagtgctcaagat
aattatgaaagacaggttattctacagtcagaaacaattcaagagttgacaaaaacatca
caagctttggcttcagctcaagaagagacaactgagctccgtaaagtggtggatgctctc
aaaactgaaaacattgacctgaagtcgaaatgggaaatagaaaagttagctatagaagct
tataagaatgaagcagataagaaatacagtgaagtcaatgaactgaacaagatgcttcac
agtcgacttgaggccttgcacatcagattagcagagaaggaacgtggaatagcttctgga
agcagttcccagagttttgctgatgatgatgggctgcaaaatgtggtgaattatcttcga
cggacaaaggaaatagctgaaacagagatctcattgttgaagcaagaaaagctacgtttg
caatctcagctagaggttgctttgaagtcagctgagaatgcacaaacatcgctaaataca
gagctagcaaaagcacgagcatctttattcacagatgacgagttcaagtctcttcaacta
caggttagagaactaactttacttcgtgaaagcaacatgcagctcagagaggagaatcgg
cataactttgaagaatgccagaagcttcgtgaagcattgcagaatgttaggattgaaacg
gagaatttggagaagcttcttagagatagagacactgagttggaaggttatagaaaggaa
attgaaattctaaagatggaaaaagtgcatcttgaaaagagaactgatgagttggtggag
aagtgcaataatgttgatcttgatgattacaatcgtctgaaagaatcttttcagcaaatt
caggtcagtttaagagagagagattcacagttagaggaaactaagaaacttttatcagaa
aagcaggatgctatatcacttttagagcgagaccttgccagaagcagaacagaattgaac
gaaagagagacgaggattaatgaaatcttgcaagctgaggcttctctgaagtctgaggct
gaaaaaatgaggcgactaagtcttcaggcaaggagaaagtctgaacaattattgaaggaa
aaagaggagatgagcaaagaaatgcaggccttttccaaacaattagaggaggccagacag
gtaaaaagaaatacagtggaccttgcaggtgaacaggctctgagggaaaaggagaaggag
aaagacaccagaatacaaattctggagaaaacacttgagaggcacagggaggacctgaag
aaggagaaggaagatcatcataaagaaaaagaaaaaagtcagaagatacggaaaacaatt
attgaatctcgtgagattgttactcagcagaagacaaagctctcagacgagctgaagaag
cataaagaagctttgagagcgcttcaagatgaagtggagaaattgaagaactccggaggt
agtcagacggaaagtacatctgtgggccaagatttttccagtactcttttggaggacttt
gcctctgcatattaccaggctgtagagaattttgaacaggttgcacaaccagcttgtggc
gagctagattctgccaccactgacactcctctggataatgcatcatctgctggtgctccg
gttggtcaagcagtcacttcattgactcaaacccctgcagtgtcagctgcaaatattcct
ccgactagaacaaatgaagagagaagacttgctgtagctaaggcaaacattaaaatggga
aggaaactagtccgtcctaatattacaaagcccaaggaacctcaaggtgatgtggagatg
tcagaagcagatgagtctaacatcgggttgtcatcccagaatacagaaagtcaaggaaat
gtaactggcctggcaacagcgtctgcgcgtaaacgcccatcagcttcagtttcttctgat
ctgcaagatgagatgctagctccagaagaaacaagctctgatacgccagctcctctgctg
aaaaagtcaaaagcttcagagagcgcacaagagggtggtgaagaaccatcagctgctcct
gtgaagctttcggaagttgtacccattgaggaatcatcagatgatgccggaaaccttcag
caaggcattaataaggaggagcatgctgatgctgaaagggaagattttgagactgcaggt
gagcaagtggaagagccaacaacggatgaacaaactcaggccgagctattgagcgacaca
ggtgaagttgcagaagaaaaactggacaaaccaagtgaaactctggtatctgatgatcaa
ttgagagatcaaactgaacaggacatccagcaaatagttacagaatctggtggtgagaga
gaagagggagaacttgttgcggactttgctgataatgatggtgatagcaatgtatttaat
gagatgggggcctctgaaattggagaatttcagccagaacaatccgtagaacgggagaat
tctcccattgctgaaccattagcttcagcgagcttagaagcaggggagattgatccttct
gaaaccccagaggaagataagaatgttgacatgactgagagcatgcttgatagttctatt
aagcttaataataatgcggatcaaattgcagaaacgagtcaggtccctggatcttctatt
gcgactaccactgatgaagtgtcagttagcacttctgttgatgccgccgggtcttcagaa
caaggtgggtctgctcctacatcttcagaacaaggtgggcctgctcccacaccagatgca
ggtgcgaaaccagtatcacctctgaatagctcaacgaccattaatctacaggagagagca
aggcaaagagcacatctgagacaggctggcttgattgcttcttcccccagcagagcccgt
ggcagggccatccgtggtcgtggtgcacgtggtggccgtactccacgtgggcaatcacct
tcctag
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