Streptomyces inhibens: KI385_32365
Help
Entry
KI385_32365 CDS
T08140
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sine
Streptomyces inhibens
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sine03009
]
KI385_32365 (rimO)
Enzymes [BR:
sine01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KI385_32365 (rimO)
Ribosome biogenesis [BR:
sine03009
]
Prokaryotic type
ribosomal protein modification factors
KI385_32365 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UKY53034
LinkDB
All DBs
Position
7137296..7138780
Genome browser
AA seq
494 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYSDISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDAADVALPGHAQDTAPEDLPEGVAPASGPRAPLRR
RLGSSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIMLVSE
NNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLVEVLTGTDKVAPYFD
LSFQHSAPGVLRAMRRFGDTDRFLELLEQIRTKAPQAGARSNFIVGFPGESEADLAELER
FITEARLDAIGVFGYSDEDGTEAASYENKVDPDEVADRLARVSRLAEELTAQRAEERVGE
TVRVLVDRIDDEDGVVGRAAHQAPETDGVTLLSTDQELSPGRMVEAKVVASEGVDLVAEV
LSVDGTGCTEEAGR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcagcggacggctgggagctggtcgaggaagccgcc
gatgccgatgtcgccgttgtcaacacctgtggtttcgtcgaggccgccaagaaggactcc
gtcgatgccctgctggaagccaacgatctgaaggatcatggccggacccaggccgtggtc
gccgtcggctgcatggccgagcgctacggcaaggagctcgccgaggcgctgcccgaggcc
gacggtgtgctcggcttcgacgactacagcgatatctccgaccgtctgcagaccatcctg
aacggcggcatccacgcctcgcacaccccccgcgaccgccgcaagctgctgccgatcagc
ccggccgagcgccaggacgccgccgatgtcgcactgcccggtcacgcccaggacactgcg
cccgaggatctgccggagggcgtcgcaccggcctccgggccgcgggcgccgctgcgccgc
cggctcggcagcagcccggtggcctcggtgaagctggcgtccggctgcgaccggcgctgc
tcgttctgcgccatcccgtccttccgcggctcgttcatctcccgccggccctccgatgtg
ctcggtgagacgcgctggctggccgagcagggcgtcaaggagatcatgctggtctccgag
aacaacacctcctacggcaaggacctcggcgacatccggctgctggagacgctgctgccg
gagctggcggccgtcgacggcatcgagcggatccgggtcagctatctgcagcccgccgag
atgcgtccgggcctggtcgaggtgctgaccggcaccgacaaggtggcgccgtacttcgat
ctgtccttccagcactcggcgcccggtgtgctgcgggcgatgcggcggttcggcgacacc
gaccgcttcctggagctgctggagcagatccgtacgaaggcgccgcaggccggtgcccgc
tccaacttcatcgtcggtttccccggcgagagcgaggccgatctggcggagctggagcgc
ttcatcaccgaggcccggctcgatgccatcggcgtcttcggctactccgacgaggacggc
acggaggccgcctcgtacgagaacaaggtcgacccggacgaggtcgccgaccggctggcg
cgggtgtcgcggctggccgaggagctgaccgcgcagcgcgccgaggagcgggtcggcgag
acggtgcgggtgctggtggaccggatcgacgacgaggacggcgtcgtggggcgggccgcg
caccaggcgccggagaccgacggcgtcaccctgctctcgaccgaccaggagctttcgccc
ggtcgtatggtcgaagcaaaggtggtggcgagcgagggcgtggacctcgtggcggaggtg
ctgtcggtggacggcacggggtgtaccgaggaggcgggcagatga
DBGET
integrated database retrieval system
