Sulfitobacter indolifex: DSM14862_03141
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Entry
DSM14862_03141 CDS
T08028
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl03030
DNA replication
sinl03410
Base excision repair
sinl03420
Nucleotide excision repair
sinl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM14862_03141 (polA)
03410 Base excision repair
DSM14862_03141 (polA)
03420 Nucleotide excision repair
DSM14862_03141 (polA)
03440 Homologous recombination
DSM14862_03141 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinl03032
]
DSM14862_03141 (polA)
03400 DNA repair and recombination proteins [BR:
sinl03400
]
DSM14862_03141 (polA)
Enzymes [BR:
sinl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM14862_03141 (polA)
DNA replication proteins [BR:
sinl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DSM14862_03141 (polA)
DNA repair and recombination proteins [BR:
sinl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DSM14862_03141 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM14862_03141 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UOA20311
LinkDB
All DBs
Position
cDSM14862:3154883..3157681
Genome browser
AA seq
932 aa
AA seq
DB search
MTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGIPIGAVAGFCNMLHRYVEGNTGPDAP
THVAVIFDKGSHTFRNDMYDQYKANREAMPEDLRPQIPLTRTATAAFNIACKELEGYEAD
DIIATLAVQARAAGGRCTIISSDKDLMQLVGDGVEMLDAMKNKTIDRDGVFEKFGVYPER
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDALLERAGEIKQPKRRQTLIDHAE
QIRLSRSLVLLDENTPIDFTIDDLEVRDPDPEQLLGFLSEMEFRTLSKRVAEVLGREAPA
IPEAPAPAVADAPQIADVPFDHSKYEQVSDAEALRVWLDRIYEVGYVAVDTETTGLDELT
AELVGVSLSVEPGQACYIPLTHKASRSDDLFGSDDLAPGQMPFEEALQLLTPMLEDPAIL
KIGQNMKYDGKIFAQLGITVAPIDDTMLMSYAMHAGLHGHGMDTLSERYLGHTPLPIKPL
LGSGKSAVTFDKVPMEDAVPYAAEDADVTLRLWKLFKPQLHRAEVTKVYETLERPLVPVL
AQMERAGILVDRDTLSRMSNAFAQKMAGLEADIHELAGETFNVGSPAQLGEILFGKMGLD
GGKKGKTGKYSTGADVLEDLATEHDLARRVLDWRQLSKLKSTYTDALQDHVNANTGRVHT
CYSIAGAATGRLASTDPNLQNIPIRSEEGRRIREAFVAPEGKVLVALDYSQIELRILAHI
AQIDALKEAFERGDDIHAMTASEMFDVPMDQMTPEIRRNAKAINFGVIYGISGFGLARNL
RIPRAEAQGFIDRYFERFPGIRTYMDDTKAFAKEHGFVQTLFGRKINTPNIGAKGPQAGF
AARAAINAPIQGTAADVIRRAMIRMPEAIADLPAKMLLQVHDELLFEVEKGAEDALIAAA
REVMENANDPVVKLDVKLTVDAGVGANWAEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgacattcggcaaaggccaccacctgcatctgatcgacggctcggccttcatctttcgc
gcctatcacgccctgccgccgctgacgcgcaaatctgacggcatccccatcggggctgtg
gcgggcttttgcaacatgctgcaccgatatgtagagggcaacaccggccctgatgcgccg
acccatgtcgccgtgattttcgataaaggcagccacaccttccgcaacgacatgtacgac
cagtacaaagccaaccgcgaggccatgcccgaagacctgcggccgcagattccgctgacc
cgcaccgccaccgctgccttcaacattgcctgcaaggagctggagggatacgaggccgat
gacatcatcgccaccctcgccgttcaggcccgcgctgccgggggccgctgcaccatcatc
agctctgacaaagacctgatgcagcttgtcggcgacggggtcgagatgctggacgcgatg
aagaacaagaccatcgaccgcgatggtgtgtttgagaaattcggcgtctatcctgagcgt
gtcgtcgatgtgcaggcgcttgcgggcgattcggttgataacgtgcctggcgcgcccggc
atcggcatcaagacggcggcactgctgatcaacgaatacggcgacttggacgcactgctg
gaacgcgcgggcgagattaagcagcccaaacgccgccagaccctgattgaccatgccgag
caaatccgtctgagccgcagcctcgttttgctggatgaaaacaccccgattgatttcact
atcgacgatcttgaggttcgcgacccggacccagagcaactgctgggtttcctgtcggaa
atggaattccgcaccctgtcgaaacgcgtggctgaggtgctgggccgcgaagcgcccgcg
atccccgaagcgccagcgcctgccgtggcagacgccccacagatcgccgatgtgcctttt
gaccatagcaaatacgagcaagtcagcgatgccgaggccctgcgcgtctggctcgaccgg
atttacgaggttggctatgtcgcggtggataccgaaaccacgggccttgatgagttgacc
gccgaactggtcggcgtgtcgctctccgtggagccggggcaggcctgctacatcccgctg
acccacaaagccagccgcagcgatgacctctttggctccgatgacctggcccccggccag
atgccctttgaagaggcgctgcaactgctgaccccgatgctggaggatcccgcgatccta
aaaattgggcaaaacatgaaatacgacggcaaaatctttgcccagcttggcattaccgtg
gcccccatcgacgacacgatgctgatgtcctacgcgatgcacgcaggtctgcacgggcat
gggatggacacgctttccgagcgttacctcggccacacgcccttgccgatcaaaccgctg
ttgggcagtggcaaatctgccgtgaccttcgacaaggtgccaatggaagacgcggtgccc
tatgccgccgaagacgccgatgtgaccctgcgcctgtggaagttgttcaagccgcagttg
caccgcgccgaagtcaccaaagtctatgagacgcttgagcgcccgttggtgccagtgctg
gcgcagatggaacgcgccgggatattggttgaccgtgatacacttagccgcatgtccaac
gcctttgcccaaaagatggcggggcttgaggctgatattcacgaactggccggagagacg
ttcaacgtaggctcgcccgcgcagctgggtgaaatcctcttcggtaagatggggcttgat
ggcggcaagaagggcaagaccggtaaatattccaccggtgccgatgtgctggaggatctg
gcaaccgaacatgacctcgcccgccgtgtgctggattggcggcaactgtccaagttgaaa
tcgacctacaccgatgccttgcaggaccatgtgaacgccaacacgggccgggtgcacacc
tgctattccatcgccggggcggccacgggccgtttggcctcgaccgacccgaacctgcaa
aacatcccgatccgttccgaagaaggccgccgtattcgtgaggctttcgtcgcccccgag
ggcaaggtgttggtggcgctggactacagccagattgagctgcgcatcctcgcgcatatc
gctcagattgatgcactcaaagaggccttcgagcgtggcgatgacatccacgcgatgacc
gcctccgagatgttcgacgtgccgatggaccaaatgaccccggaaatccgccgcaatgcc
aaggcgatcaactttggcgtgatctacgggatttccggctttggtctggcacgcaacctg
cgcataccacgggccgaggcgcagggcttcatcgaccgttatttcgagcgtttccccggc
atccgcacctatatggacgacaccaaggccttcgccaaagagcatggctttgtgcagacg
ctctttggccgcaagatcaacacccccaacatcggcgccaaggggccgcaggccggtttc
gccgcccgcgccgcgatcaacgcgccgatccaaggcaccgctgccgatgtgatccgccgc
gccatgatccgcatgcctgaggccattgctgatctgcctgcaaagatgctgttgcaggtg
cacgatgaactgctgttcgaggtggaaaaaggggccgaagacgcgctgatcgcagccgcg
cgggaggtgatggaaaatgccaatgatccggtggtgaagctggacgtaaagctgaccgta
gatgctggcgttggcgcaaactgggcggaggcacattga
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