Shewanella inventionis: K8B83_04340
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Entry
K8B83_04340 CDS
T07895
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sinv
Shewanella inventionis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinv03009
]
K8B83_04340 (rimO)
Enzymes [BR:
sinv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K8B83_04340 (rimO)
Ribosome biogenesis [BR:
sinv03009
]
Prokaryotic type
ribosomal protein modification factors
K8B83_04340 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UAL44089
LinkDB
All DBs
Position
complement(948315..949730)
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AA seq
471 aa
AA seq
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MTVETFTPKQTTTLDIPVKTLEANSTSIPSTGNRIGFVSLGCPKNLVDSERILTQLRTEG
YDVTNSYDDADLVIVNTCGFIDSAVQESLETIGEALAANGKVLVTGCLGVKKDEIVELHP
NVLGVTGPHAYDEVLKQVHLHVEKPKHNPLMDLVPDHGIKLTPKHYAYLKISEGCNHRCT
FCIIPSMRGDLDSRPIGDVLGEAQRLVNAGVKELLVISQDTSAYGVDVKHKTAFWDGMPV
KTHMQQLCEELAKQGVWVRLHYVYPYPHVDDIIPLMAEGKILPYLDIPFQHANKRILKLM
KRPGSSDKVLERIAKWREICPELVIRSTFIVGFPGETEEEFEELLDFLEEAQLDRVGCFK
YSPVEGAKANDLPDHVPEDVMEDRLQRFMALQAQISADKLQARIGQEYLILIDEVNTEGA
IGRSYMDAPEIDGKVYLTDEFDVQPGDQVWVQIIHADEHDVWGVKVEDEDE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgaaacatttacacccaagcaaacaaccacgctcgatatcccagtaaaaact
cttgaggctaacagcacaagcatcccaagtactggtaatcgaattggttttgtttcattg
ggctgtccaaaaaacttagtcgactcagaacggatcctcacccaacttcgcacagaaggg
tacgacgtaaccaacagttatgacgatgctgacctcgttattgtgaacacctgtggcttt
attgacagcgcggtacaagagtcgttagaaaccattggcgaagcattagctgcaaatggc
aaagtgcttgtaacaggctgtttaggcgttaaaaaagatgaaatcgttgaacttcaccct
aacgtgttaggcgttaccggcccacatgcctatgatgaagtgcttaaacaagtgcacctg
catgttgaaaagcctaagcacaatccactgatggacctagtgcctgatcatggcattaag
ctaacaccaaagcattacgcctatttaaaaatatctgaaggctgtaatcaccgttgtacc
ttctgcattattccatcaatgcgcggagatttagactctcgccctattggtgacgtactc
ggcgaagcccagcgcttagtcaacgccggcgttaaagagttattagtgatatctcaagac
acgtcagcttatggcgttgatgttaaacacaaaacggcattttgggatggcatgccagtt
aaaactcacatgcaacagctttgtgaagaattagccaaacaaggcgtgtgggtgcgtttg
cattatgtttacccttacccacatgtggatgacattattccattaatggccgaaggtaaa
attctgccctatttagacattccgtttcagcatgccaacaaacgtatattgaagttaatg
aaacgccctggtagctcagacaaagtattagaacgtatcgccaaatggcgcgagatttgt
ccagaattagtgattcgttcaacctttattgtcggctttcctggtgaaaccgaagaagaa
tttgaagagctattagactttttagaagaagcacaattagaccgcgtaggttgctttaaa
tactcaccggtagaaggcgctaaagcaaacgatttaccagaccatgtgccagaagatgtt
atggaagatcgtctacaacgctttatggcgctacaagcacaaatcagtgccgacaagttg
caagcgcgcattggccaagagtatttaatcttaattgatgaagtaaataccgaaggtgca
attggccgctcatacatggacgcgccagaaattgacggtaaagtgtatttaaccgacgag
tttgacgtgcaaccaggtgatcaggtttgggtacaaattattcacgctgatgaacatgat
gtctggggcgtaaaagtggaagatgaagacgaataa
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