Ruegeria sp. TM1040: TM1040_0555
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Entry
TM1040_0555 CDS
T00359
Name
(GenBank) fumarate lyase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00362
Benzoate degradation
sit01100
Metabolic pathways
sit01120
Microbial metabolism in diverse environments
sit01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TM1040_0555
Enzymes [BR:
sit01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
TM1040_0555
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
ABF63288
RoseoBase:
TM1040_0555
UniProt:
Q1GJ78
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Position
complement(592559..593632)
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AA seq
357 aa
AA seq
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MNPLTSSNPYFAGLFADQEITALFEGAATADAFLAYEMALTRAAAEVGQIDIGLAQRALA
AMVDFTPDVAELQSDLSADGMAVPGYVRQLKAHVGAECVAAVHPGATSQDLIDTAQALAL
RAANEIYISRLTTLIDALRDLEETHGDNRLMGRTRMQAALPISAGHRISSWISPLVRHTS
RLEILRPEVEALQFGGPVGDGQRSQPHAAAMADHMGKALGLRAPERCWHTERDSLVTYAG
WLSALTGSLGKFGQDVCLMVQQGVDALAQAGGGSSSAMAHKQNPVTAEMLVTLSRYNAGQ
VALMHQASVHEQERSGAMWTLEWMVLPAMMTCTGAALRLATRQVQAITRIGEPPTTR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccgctgacctcatcgaacccctattttgcaggcctttttgccgaccaggaaatc
acggccttgtttgaaggggcggccacggcagacgcgttcttggcgtatgagatggccctg
acccgtgccgccgcagaggttgggcagatcgacatcggtctggcgcagcgtgcgctggcg
gccatggtagatttcacccccgatgttgcggagcttcagagcgatctctcagccgacggc
atggcggtgcccggatatgtgcgtcaactcaaggcccatgtcggcgccgaatgtgtcgcc
gccgtgcatccgggggctaccagtcaggacttgatagacactgcacaggccttggctctt
cgcgccgcaaacgaaatttatatctcgcgcctcaccacgctgatcgacgcgctgcgcgat
ctggaagaaacccatggcgataatcgcctgatggggcgcacccggatgcaggcggcgctg
ccgatctccgccggacatcggatctcaagctggatctcaccgctcgtgcgtcatacctcc
cggctggagatactgcgccccgaggtagaagccctgcaatttggtggcccggttggcgac
gggcagcgcagccagccccatgccgccgccatggccgaccacatgggaaaggcactgggg
ctccgcgcgcctgaacgctgctggcacacggagcgcgactcattggtcacatatgccgga
tggctttctgcgcttaccggcagtctgggcaaattcggccaagacgtgtgtttgatggtg
caacagggtgtggatgcgctcgcgcaggccggaggcggcagcagttctgccatggcgcac
aagcaaaacccggttaccgcagagatgctggtgacgctctcacgctacaacgccggacag
gttgccctgatgcatcaggcctccgtgcatgaacaggagcgctcgggcgccatgtggacg
cttgagtggatggttctgccggcaatgatgacctgcaccggagccgcactccgcctcgca
acccggcaggtgcaggcaatcacgcgcatcggcgagcctcccaccacgcgttga
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