Ruegeria sp. TM1040: TM1040_2219
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Entry
TM1040_2219 CDS
T00359
Name
(GenBank) cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00860
Porphyrin metabolism
sit01100
Metabolic pathways
sit01240
Biosynthesis of cofactors
Module
sit_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
TM1040_2219
Enzymes [BR:
sit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
TM1040_2219
6.3.5.11 cobyrinate a,c-diamide synthase
TM1040_2219
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Gene cluster
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Motif
Pfam:
GATase_3
CbiA
AAA_26
MobB
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABF64951
RoseoBase:
TM1040_2219
UniProt:
Q1GEG5
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Position
2330775..2332091
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AA seq
438 aa
AA seq
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MIPFPKGLMISAPSSGTGKTTVMLGLLRALKDDGLTVQPFKSGPDYIDPAFHLAAARRAS
FNLDTWAMDDTLLDAVTTQAQGAGICVGEGSMGLFDGVATRGQSGFGSSAETALRMGWPV
VLVIDVGGQAQSAAATALGFKMYNPDLPFAGVILNRVASPRHDRLTRLGMERAGVKVLGS
LPRRGDLALPERHLGLIQAVEHPDLEAAIAGYAAFLRENVDIDAIRAVASSAAAPAPRAL
PRPPAQRIALARDAAFSFTYPHLLEGWRAAGAEILPFSPLNNEAPAKDADLVWLPGGYPE
LHGSTLAAADIWRKGMAEHAKTKPVHGECGGYMALGEALIDKDGTRHQMAGLLGLVTSYE
KRKFHLGYRRAALEAPMPGFDSGAFLRGHEFHYSTILDEPDAPLARVMDADGNPVPETGS
VKGHVTGTFFHLITGEQP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatccccttccccaaaggcctgatgatctccgcgccctcctccggcaccggcaagacc
actgtcatgctgggccttctgcgcgcgctcaaggacgatggcctgaccgtccagccgttc
aaaagcgggccggattatatcgacccggccttccaccttgctgccgccagacgggcgtcc
ttcaaccttgatacatgggccatggacgacacgctgctagacgctgtcaccacccaagcc
caaggcgcgggcatctgcgtcggcgaagggtcgatggggctcttcgacggagtcgccacc
cgcggtcagtccggctttggctcctccgcggaaaccgcgctcaggatgggctggccggtg
gtgctggtgattgatgtgggcggtcaggcgcagtcggcggcggccaccgcgctggggttc
aagatgtataaccccgatctgccctttgccggagtgatcttgaaccgggtcgcgagtccc
cgtcacgaccggcttacccggcttgggatggagcgggcgggcgtcaaggtgctgggctcc
ctgccgagacgcggcgatctggctctgcccgaacgccatctcggcctcattcaggcggtt
gaacaccccgatcttgaggccgcaatcgccggctatgcggccttcttgcgcgaaaacgtc
gacattgacgcgatccgggcggtggccagctccgccgcagcaccggcccctcgcgccctg
ccgcgtccgcccgcacaacgcatcgcattggcgcgcgatgcggcgttttcctttacctat
ccgcatcttctcgagggttggcgcgccgccggagcagagatcctgcccttctcgccgctc
aacaatgaagcccccgccaaggacgccgatctggtctggctgcccgggggctatcccgag
ttgcacggctccaccctcgccgcagccgacatctggcgcaaaggcatggcagaacacgca
aaaaccaaaccggtgcatggcgagtgcggcggctacatggcccttggcgaggccttgatc
gacaaggacggcacgcggcaccagatggcggggctccttgggcttgtgacatcctatgaa
aagcgcaagttccacctcgggtatcgccgcgcagcgctagaagcgccgatgccgggcttt
gacagcggcgcgtttctgcgcggacatgagttccattattcgaccatcctcgacgagcca
gacgccccactggcccgggtgatggacgccgacggcaacccggtgcccgagaccggctcc
gtcaaaggccatgtcaccggtacgttctttcacctcatcaccggagagcagccatga
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