Ruegeria sp. TM1040: TM1040_2261
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Entry
TM1040_2261 CDS
T00359
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TM1040_2261
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sit01007
]
TM1040_2261
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sit03016
]
TM1040_2261
Enzymes [BR:
sit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
TM1040_2261
Amino acid related enzymes [BR:
sit01007
]
Aminoacyl-tRNA synthetase
Class I (A)
TM1040_2261
Transfer RNA biogenesis [BR:
sit03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TM1040_2261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
tRNA-synt_1c
tRNA-synt_1e
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
ABF64993
RoseoBase:
TM1040_2261
UniProt:
Q1GEC3
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All DBs
Position
2375821..2377464
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AA seq
547 aa
AA seq
DB search
MSVLREEALKSKAWPFEEARRILKRYAKGAPEKGYVLFETGYGPSGLPHIGTFGEVARTT
MIKTAFEVISDIPTKLICFSDDLDGMRKIPGNVPNAESLTEHLQKPLTSVPDPFGTHESF
GHHNNAMLRRFLDTFGFEYEFYSATEFYGSGQFDEVLKRAVDKYDDIMAIMLKSLREERR
QTYSIFLPIHPETGRVLYVPMKKVCAETYTITFDDEDGREWTLPVTGGNVKLQWKPDFGA
RWAALGVDFEMYGKDHSTNTPIYDGICRVLGQRAPEHFTYELFLDENGQKISKTSGNGVS
IDEWLTYASTESLAYFMYQKPKTAKRMHFDVIPKAVDEYHQQLRAYHGQDLKAQLSNPVW
HIHGGNVPQSDMVVPFSMLLNIASVSNAEDKETLWGFINKYAPDATAETHPGMDQAAGHA
VRYFNDFVKPAKTYRLPTDQERAALTDLADALRSSEAALAAIAKKNELVGNDDPLPEANF
ADEEFLQSVVFAIGKIHGFEPLRAWFSAIYEVLLGASQGPRFGGFIALYGVEDTITLIES
ALAGDLV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttctgcgcgaagaagctctgaagagcaaagcctggccgtttgaagaagcacgc
cgcattctcaaacgttacgccaagggcgcgccggaaaagggctatgtgctctttgaaaca
ggctatgggccctccggcctgccccatatcggcacctttggcgaggtggcccgcaccacc
atgatcaaaaccgctttcgaggtgatctccgacattccgaccaagctgatctgcttttcc
gatgaccttgacgggatgcgcaagatccccggcaacgtgcccaacgccgagagcctcacc
gagcatctgcaaaagccgctcacctcggtgccggacccgtttgggacgcatgagagcttt
ggccaccataacaacgcaatgctccgccgcttcctcgacaccttcggctttgagtatgag
ttctactccgccaccgagttctacggctccggccagttcgacgaagtgctgaagcgcgcg
gtcgacaaatacgatgacatcatggcgatcatgctgaagtccctgcgtgaagagcgccgc
cagacctattcgatcttcctgccgatccaccccgagaccggccgcgtcctttatgtgccg
atgaaaaaggtctgcgccgagacctataccatcacctttgacgatgaagacggtcgcgag
tggaccctgccggtgaccggcggcaatgtgaaactgcagtggaagcctgactttggcgcc
cgctgggccgcgcttggcgtcgacttcgagatgtacggcaaggaccactccaccaataca
ccgatttatgacggcatctgccgggtgctgggccagcgcgcgccggagcatttcacctat
gaattgttcctcgatgaaaacggccagaagatctccaagacctccggcaatggcgtctcc
atcgacgaatggctgacctacgcttcgaccgaaagccttgcgtatttcatgtatcaaaag
cccaagaccgccaagcggatgcattttgacgtgatccccaaggcagtggatgaatatcac
cagcaattgcgggcctatcacggtcaggacctgaaggcgcagctcagcaacccggtctgg
cacatccacggcggcaacgtcccgcagtcggatatggtggtgccgttctcgatgctcttg
aacatcgccagcgtctccaacgccgaagacaaggaaaccctctggggcttcatcaacaaa
tacgcgcccgacgccactgccgagacccaccccggcatggatcaggccgcaggccatgca
gtgcgctatttcaacgactttgtgaaacccgcaaaaacctaccgcctgcccaccgatcag
gagcgcgctgcgctcacggatctggccgatgcgctgcgctcttccgaggcggcactggcc
gcgatcgccaagaaaaacgaactggtcggcaatgatgatccgctgcccgaggccaacttt
gccgacgaagagttcctgcagtcggtggtctttgcgattggcaagatccacgggttcgag
ccccttcgtgcctggttctctgcgatctacgaggtgcttctgggtgcaagccagggacca
cgttttggcggcttcatcgcgctctatggcgtcgaggacaccatcacgctgatcgaaagc
gccttggcgggcgatctggtctga
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