Ruegeria sp. TM1040: TM1040_3408
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Entry
TM1040_3408 CDS
T00359
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00280
Valine, leucine and isoleucine degradation
sit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TM1040_3408
Enzymes [BR:
sit01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
TM1040_3408
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABF62380
RoseoBase:
TM1040_3408
UniProt:
Q1GLT6
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Position
mega:complement(428668..430182)
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AA seq
504 aa
AA seq
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MANPLFDRLFGVYAGKTTPFLYLADGQVWTHARFLDQVAQIAHVLIKAGLTPGDRVAVQV
EKSPEALALYGACVQAGLIFLPLNTAYTADELSYFIENSGASLVICDGQNQSTLATIAEG
LNASVETLNADGSGSLIERAAAMATDFETVDRSGDDLAAFLYTSGTTGRSKGAMLTQDNL
LSNAETLVKEWRFTDKDVLLHALPIFHTHGLFVASNVTLLAGGAMIFLPKFDLDRVIAQL
PKATSMMGVPTFYTRLLSDPRFTKELTQHMRLFISGSAPLLAETHIQFEERTGHRILERY
GMTETNMNTSNPYDGERRAGTVGFPLPGVELKITNPETGTSLPRGDIGQIEVRGPNVFQG
YWQMPEKTAAELREDGFFITGDLGMIDEDGYVHIVGRNKDLIISGGYNIYPKEIELVLDE
QSGVLESAVIGVPHPDFGETVLGIIVPETGTSPDLESIMTSVQGQLARFKHPRKLMVVDE
LPRNTMGKVQKNILRDSYKDMFSD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccctttgtttgatcgccttttcggtgtttacgccggcaagacgacccccttc
ttgtatctggcagatggccaggtctggacgcacgcacgttttttggatcaggttgcccag
atcgcacatgtgctcatcaaggcgggcctcacgccaggggatcgcgtggccgttcaggtc
gaaaaatcccccgaagcgcttgcgctttatggcgcctgcgtacaggccggtctgatcttc
ttgccgctcaataccgcctataccgccgatgaactctcgtatttcatcgaaaacagtggt
gcatcgcttgttatctgcgacggccagaaccaaagcacgctggccacgattgctgaaggt
ctgaacgcaagtgtggagacgctgaacgcagatggaagcggctctttgattgagcgcgca
gcggcaatggcaacggactttgagaccgtagaccgcagcggcgatgatcttgccgcgttc
ctttatacgtccgggacgacgggacgctccaaaggggcgatgctgacgcaggacaattta
ctgtcgaacgctgagaccttggtaaaggaatggcggttcacagataaagacgtgttgctg
cacgccttgccgatttttcacacgcatgggctttttgtggcgagcaatgtgacgcttctg
gccggaggcgcgatgatctttttgcccaagttcgatctggaccgcgtcatcgcgcaactg
cccaaagcgaccagtatgatgggcgtgcctaccttctatacccgcctgttgagcgatccg
cgctttaccaaagagctgacccaacacatgcgcctgttcatttcaggttccgcacccttg
ttggcggaaacccatatccaattcgaagagcgcactgggcatcggattctcgaacgctac
ggcatgacggaaaccaacatgaacacctcaaacccctacgacggagaacggcgtgcgggc
actgttggcttcccactgcccggtgtggagttaaagatcaccaacccggaaacgggtacc
tcactgccacgaggcgacattggacagatcgaagtgcgcgggccaaacgtctttcaagga
tattggcagatgcctgaaaaaactgccgcagaactgcgagaggacggttttttcattacc
ggcgatctcggtatgatcgacgaagatggctatgtgcacattgtgggccgcaacaaggat
ctgatcatttcgggtgggtacaatatctatccgaaggagatcgaactggtgctggatgaa
cagtctggcgtgttggaaagcgcggttatcggcgttccgcacccggattttggcgaaacc
gtgctgggaatcatcgtcccggaaacgggtacctcaccggacctcgagtcgatcatgacg
tcagttcaaggccagcttgctcggttcaaacatcctcgcaaattgatggttgtcgacgaa
ttgccgcgaaacacgatggggaaagttcaaaagaacatccttcgagacagctacaaagac
atgtttagcgactga
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