Ruegeria sp. TM1040: TM1040_3776
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Entry
TM1040_3776 CDS
T00359
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00053
Ascorbate and aldarate metabolism
sit00520
Amino sugar and nucleotide sugar metabolism
sit00541
O-Antigen nucleotide sugar biosynthesis
sit01100
Metabolic pathways
sit01240
Biosynthesis of cofactors
sit01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
TM1040_3776
00520 Amino sugar and nucleotide sugar metabolism
TM1040_3776
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TM1040_3776
Enzymes [BR:
sit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
TM1040_3776
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Gly_kinase
Motif
Other DBs
NCBI-ProteinID:
ABF61909
RoseoBase:
TM1040_3776
UniProt:
Q1GN57
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Position
unnamed:complement(22480..23481)
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AA seq
333 aa
AA seq
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MRTALITGTAGFIGYHLATYLLASGWQVVGLDCLSPYYDIALKRRRHAMLEVNDNFIPVI
GKLEDPGRLMGLLADHKPNAVIHLAAQAGVRHSIDAPRDYLEANLIGTFEVLEAARAHPP
EHIMIASTSSAYGANTNIPFDEHQKADHQMSFYAATKKAGETMAHSYAHLYGLPTTMFRF
FTVYGPWGRPDMALFKFTKAIEAGEAIDVYNHGRMSRDFTYIDDLVAGITGLIEAVPGDT
PVSTQDTLSPVAPFRIVNIGASKPTPLMDYIAALETALETTARKNLMEMQPGDVPATWAD
TTLLSQLTGYEPQVSVEEGVARFVAWYRGYYAS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgctctcatcaccggcacggctggcttcattggctaccatcttgcgacttat
cttctagcctcaggctggcaggttgtagggctcgattgtctttcaccttattatgacatc
gccttaaaaaggcgccgccacgctatgctggaggtcaacgataatttcatccctgtgatc
ggcaagctcgaagatccagggcgcttaatgggcctactcgctgaccacaaacccaatgcg
gtgatccatctggccgctcaagccggagtgcgccattcaattgacgcgccgcgcgactat
ctcgaggccaacctgataggtacttttgaagtgctggaagctgcccgcgcgcatccgccc
gagcatataatgattgcctccacgtcttcggcttatggtgccaataccaacatccctttc
gatgagcaccagaaagcagatcatcaaatgtcattttatgccgccaccaaaaaggcaggc
gagacgatggctcattcctatgcacacctctatggtctaccaaccacgatgttccggttc
ttcacggtgtacggcccctggggtcgaccggatatggcgttgttcaagttcaccaaagcg
atagaggccggtgaggcgatcgatgtctataaccatggacgcatgagccgagactttact
tatatcgatgatttggtggcgggtatcaccggactgattgaggcagtgcccggtgatacg
cctgtctctacgcaagacaccctgagcccagttgcccctttcaggatcgtcaatatcggg
gcctcaaaacccacgccgctgatggattatattgctgcgctagaaaccgcgctagagacc
accgcccgaaagaacttgatggagatgcagccaggagacgtgccggcaacctgggcagac
accactttgttgagccagcttaccggctatgagcctcaggttagtgtcgaagagggtgtc
gcccgttttgtcgcttggtaccgaggttattatgccagctga
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