Setaria italica (foxtail millet): 101753676
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Entry
101753676 CDS
T02818
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101753676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101753676
Enzymes [BR:
sita01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101753676
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101753676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpa2_4
Motif
Other DBs
NCBI-GeneID:
101753676
NCBI-ProteinID:
XP_022681373
LinkDB
All DBs
Position
IV:complement(33756069..33772879)
Genome browser
AA seq
1754 aa
AA seq
DB search
MADLRGIEAASEEVDSIHFSFYGDDEIKRSSVKKITKSERLDAKNLPVPGGLLDPAMGPI
NDTDTCKSCGQHSVRCPGHFGHIELAKPLFNPLLFTSLKNLLHVTCFHCHKFRLNKEQVD
RYVNELELLVKGDVARAKNLEDSGKRASPSEEDEDITEATSCDKPSPEKDKKTWTSVQLK
EVLSIFSKIMKKRQKKCAKCDMKSPTFSSPIFGWLVKDTSASAVRANAIADFKLKGDGGA
HSSGETGVSGFDEERTSPQSKGSINEVRHLSDDTIKEFVASSGKKHLLPTEVESILKGLW
KNEARFCMLLCDFQQDTLSVSEKRKGYEMFFLNSLLVAPNRFRPSTSSSLGIMEHPQNVL
LSKVQEANLALQHNSASSNHMDVLRRWMDLQRSVNVLYDSSKGIVKSEKNAHGIRQLLEK
KEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFATRLTYPEKVTPWNAKKLQEA
VRNGADIHPGATHYRDNSNIYKLQAAPAKRRAIAKMLPASRGSISQPGKDPNCEFESKVV
YRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHF
PQDEISRAEAMNIVDANKQYIGPRSGDAVRGLIQDHIVGAVLLTKQDTLLSREEYSQLVY
GSCVPSNWGPRQPGIKVSAIKDDDALGFVLPAILKPKPLWTGKQVITTILNHLTKGRSPF
TVEQKGKISEEHLTPKKFEVSKDKDPPTQEKKDKDPSAQEKKDKDPHAQEKKDEDEEEVE
LVEKKEEEEEEVELVEDDDEGEEEEEEEEEDNGAEEEKEDKEKQEKKRKESESERKIAIS
ELVLYIKNNELIKGMIDKAQFGQYGIVHTVHELYGADTAGILLSTFSRLFTLFLQFHGFT
CGVDDLLLCQKADEARRSIISESDKYSEKAHGTFIKTGKDGEELQMEVEKVIRRDGESAT
VNMDREISNALSNITSDVNKNVFPYGLQKPFPGNCLTLMTATGAKGGDVNMYQISSLLGQ
QELEGKRVPRMVSGKTLPCFLPWDTSSRAGGFISDRFLTGLRPQEYYFHCMAGREGLCDT
AVKTSRSGYLQRCLIKCLESLKVSYDHTVRDVDGSIVQFCYGEDGVDVLKTSFLNKFKEL
ADNKKVVLDKIKGHKQNQLLSKPNGYITTLPKKLVAEAKEFLKLLKEKKSSDIKKGLMCD
IKKKGLMKLLKVKYLYSLVDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIP
RLKEILMTASANISTPIMVCPLLEKWTRDDARRVAAKLRRVRVADIVEKIEVCTVPFYNT
NGHVSTLYKLQMKLYPQKHYPPQSDLTVDECQTTLRTVFVDAMEHAIEKHLDLLHKINEI
RAVKVNDAEGSLSDGGEESESRHGDGEETGMSDGDDENDNDDDLGTDAEKRKRQERDEME
YDDDTENEEGMDSESEEETKVKHQSEEDPAESGDDLQEADEEHKTSKSDMTSVDDMSYSA
KKVKKSKDKHETAKLQERTHTEGKSDERKQDQMTYKRKKKLKRTVHVESKDLDFEIHYAF
CDEPHILLAQIAQKTARSIFVRACKNIDKCEVEEKKEKGSSAVLKTSGVNFEVFWNLRKY
ISINKITTNDIHAMLKTYGVEAARATIIEEVNHVFGVYGIKVDPRHLSMIADFMTFDGGY
RPMNRLGMGQFSTSPFGKMTFETATKFIVDAATHGESDSLECPSASICLGKPAKVGTGTF
GLLQNLALEQPMAI
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctgcggggtatcgaggcagcatcagaggaagtggattcaatccatttcagc
ttctacggtgatgatgaaattaagaggagcagcgttaaaaagataaccaagtcagagcgc
cttgatgccaaaaatcttcctgtgccaggtggattactggaccctgcaatgggaccaatc
aatgatactgatacctgcaagagttgtggtcagcattctgttcgctgccctggtcacttc
ggtcatattgagttggcaaaaccattgttcaatcctttgctgtttacaagtctgaaaaac
cttctccatgtcacatgcttccattgtcacaagttccgcttgaacaaggaacaggttgac
agatatgtgaatgaacttgaattgttagtaaagggtgatgttgcccgtgctaaaaatttg
gaagactcaggtaaaagagcatctccttcagaggaagatgaagacattactgaagccact
tcatgtgataagccatctcctgagaaggacaagaaaacctggacatcggtccaattgaaa
gaggttctgtctattttttccaagataatgaaaaagagacagaagaagtgtgcaaaatgt
gacatgaagagcccaacattctcaagccctatatttggctggctggtcaaggacacaagt
gcttctgctgtaagagcaaatgcaattgccgattttaaactgaagggagatggcggtgct
cacagctcaggggaaactggggtttctggttttgacgaagaacgtacttcacctcagtcc
aaaggatcaatcaatgaagttagacacctttctgatgacacaattaaagaattcgtggca
tcatcaggaaagaagcatctattgcctacagaggttgaatctattctcaagggtttgtgg
aaaaatgaagccaggttctgcatgttactttgtgacttccagcaggatacgctaagtgta
tcagaaaagagaaagggctatgagatgtttttcttgaatagtctccttgtggcaccaaat
agattccgtccatcaactagctctagtcttggaattatggaacatccacaaaatgttctg
ctaagtaaagtgcaagaagccaatcttgcactacagcataatagcgccagttctaatcat
atggatgttcttagaagatggatggatctacaacgaagtgtaaatgtgttgtatgatagt
agcaaaggcatcgtgaaaagcgagaagaatgctcatggtatacgacaattattggaaaag
aaagaaggaattcttcgacagaaaatgatggggaagagggttaattatgcatgccgatct
gttatatctccagatccgtacttggctgttaatgaaattggcattcctcctgtttttgca
acacggttgacgtatcctgagaaagtaacaccctggaacgccaaaaaactccaagaagct
gtaaggaacggtgcggatattcacccaggtgcaacacattacagggacaacagtaacatt
tataagttacaggcggcccctgccaaacgccgtgccattgctaagatgctacctgcatca
agaggatcaatttctcagcctgggaaagaccctaattgtgaatttgaaagcaaggttgta
tatcgacatcttcaagatggtgacattgtacttgtgaataggcagcctactcttcacaag
cccagcatgatggctcattttgttcgagtgttgcctggagaaaagacgatacgaatgcac
tatgccaattgcagcacctacaatgctgattttgatggagatgagatgaatgtacacttt
ccacaagatgaaatatctcgtgctgaggctatgaacattgttgatgcaaacaagcaatac
attggtcctaggagtggtgatgctgtcagaggtctaatacaggaccacattgttggtgct
gtactactgacaaaacaggacacccttctaagccgtgaagaatatagtcagcttgtctat
gggtcttgtgtgccctcgaattggggccctcgtcaacctggtataaaggtgtctgctatt
aaggatgatgatgcattaggatttgtccttcccgctattttgaagccaaagcccttatgg
acaggaaaacaggttataacaaccatcttgaatcatttgacaaaaggtcgtagtccattt
actgtggagcagaagggaaaaatatcagaagaacatctaacccctaaaaaattcgaagtt
tctaaggataaagatcctcccactcaagaaaaaaaagataaagatccttccgctcaagaa
aaaaaagataaagatcctcacgctcaagaaaaaaaagatgaagatgaagaagaagtagaa
ttagtagaaaaaaaagaagaagaagaagaagaagtagaattagtagaagatgatgatgaa
ggagaagaagaagaagaagaagaagaagaagataatggtgctgaagaagaaaaagaagac
aaagaaaaacaagaaaagaaaagaaaggaaagcgaaagcgaaagaaaaatagctatttct
gaactggttttatatattaaaaacaatgagctcataaagggcatgatagataaggcccag
ttcgggcaatatgggatagttcatactgttcatgaactctatggtgcagatacagctgga
atactgctctcgacattcagccgcttgtttacgctgttcttgcagtttcatggttttact
tgtggggtggatgacctgctactatgccaaaaagccgatgaagcgagaaggtcaattatc
agtgaaagtgacaagtacagtgaaaaagcccacgggacatttataaaaactggaaaggat
ggtgaagaattgcaaatggaggtggaaaaagttataagaagggatggggaatctgccaca
gttaacatggacagagaaattagtaatgctctcagcaatataacatctgatgtcaataaa
aatgtattcccttatggtctacaaaagccttttcctggaaattgtctcactcttatgact
gcaactggagctaaaggtggcgatgtcaacatgtatcaaatatcatcattgctagggcag
caagagttagaaggaaaacgtgttccgcggatggtttctgggaagactttaccgtgcttt
ctgccatgggatacttcttcaagggctggtggtttcattagtgatcgatttttaactggt
ctgcgccctcaagaatattactttcattgcatggcaggcagagaagggttgtgtgacaca
gcagtcaaaacatcccgtagtggataccttcagcgttgtcttatcaaatgtctggaatcg
ctgaaagtctcttacgatcacactgtacgggatgttgatggatcaattgtacagttctgc
tatggagaagatggagtcgatgtgctgaaaactagctttctcaacaagttcaaagaactt
gctgataacaagaaagttgtccttgacaagataaaaggccataagcagaatcagctgtta
tcaaaacctaatggctacattactacactgcctaagaagttggttgctgaagcaaaagag
ttccttaagctcttaaaggaaaagaaaagcagtgacattaagaagggactaatgtgtgac
attaagaagaagggactaatgaagttactgaaagtcaaatacctatatagtcttgtagat
cctggcgaggctgttggtgtggttgctgctcagtcaataggagaaccttcaacacagatg
acgctcaacacttttcatcttgctggaaggggtgagatgaatgtaacgcttggcatacct
cggttaaaagaaatactgatgactgcatcagctaatattagtacacctattatggtttgc
cctctgcttgaaaagtggactagggacgatgctaggcgggtggctgcaaaacttaggagg
gttcgtgtagctgatatagtggagaaaattgaagtatgcacagttcctttttacaatact
aatgggcacgtttcgaccctgtacaagttacaaatgaaactctacccacaaaagcattac
cctcctcagtcagatcttactgtagatgagtgtcagacaaccttgagaacagtttttgtt
gatgcgatggaacatgcaattgaaaagcatctagatctgctgcacaaaattaatgaaatt
cgtgctgttaaggtaaatgatgcagagggctcattatcagatggcggtgaagaatctgaa
agtagacatggtgatggagaagagactggtatgagtgatggtgatgatgaaaatgataat
gatgatgacttgggaactgatgcagaaaagaggaaacggcaagagagagatgagatggag
tatgatgatgatactgaaaatgaagagggaatggatagtgaatctgaggaagagaccaaa
gttaaacatcagagtgaggaggatccagctgagtcaggtgatgatttgcaagaggctgac
gaggaacacaaaacctcgaagtctgacatgacttcagtggatgacatgtcatattctgct
aaaaaggtgaaaaaatcaaaagataagcatgagacagctaagctccaagagagaactcat
actgagggaaaatcagatgagcgtaaacaggatcaaatgacttacaaacgtaagaaaaag
ttaaaaaggactgtccatgttgagtcaaaagatttagattttgagattcactatgccttt
tgtgatgaacctcacattttactagctcagattgcccagaagacagctaggtctattttt
gtaagggcctgcaagaacattgacaaatgtgaagttgaggaaaaaaaagagaaaggtagc
tctgctgttctaaaaacgtcaggggtgaactttgaagtattctggaacctcaggaaatac
atcagcatcaacaagatcacgacgaacgacatccacgcgatgctgaagacgtatggggtg
gaggccgcgcgggccaccatcatcgaggaagtgaaccatgtgtttggcgtctatggcatc
aaagtggacccgaggcacctgagcatgatcgccgatttcatgacattcgacggcggttac
cgccccatgaacaggctggggatgggccagttcagcacatcaccatttggcaagatgaca
ttcgagacggcgaccaagttcatcgtggatgcggccacacatggggagtcagactcgctg
gagtgcccctcggccagcatctgcctcgggaagcctgcgaaggtggggactgggaccttt
gggttgctgcagaaccttgctttggagcagcccatggcgatctaa
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integrated database retrieval system
